RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CC2D1AQ6P1N0 951 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 METTL7BQ6UX53 244 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 RBM23Q86U06 439 aaKnown RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 RTN4RL1Q86UN2 441 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ADHFE1Q8IWW8 467 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 SAMD3Q8N6K7 520 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 CLRN3Q8NCR9 226 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 SMARCC2Q8TAQ2 1214 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 LMBR1Q8WVP7 490 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 DNAJB3Q8WWF6 145 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 TOE1Q96GM8 510 aaKnown RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 INPP4AQ96PE3 977 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 UPF3BQ9BZI7 483 aaKnown RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 CDH19Q9H159 772 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ACSS2Q9NR19 701 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 HSPBP1Q9NZL4 362 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 MUTYHQ9UIF7 546 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 SMG5Q9UPR3 1016 aaKnown RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 FAM50BQ9Y247 325 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 SPO11Q9Y5K1 396 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ZDBF2Q9HCK1 2354 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ZNF318Q5VUA4 2279 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 GSTTP1A0A1W2PQM5 241 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 ERICH2A1L162 156 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 FAM90A27PA6NNH2 459 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 C5orf67F2Z3F1 127 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 HIP1O00291 1037 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 FIBPO43427 364 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 MBTPS2O43462 519 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 NCK2O43639 380 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 CAND2O75155 1236 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 CYP17A1P05093 508 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 RB1P06400 928 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 ASGR2P07307 311 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 CYP21A2P08686 494 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 FAHP16930 419 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 PFKLP17858 780 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 DNAJB1P25685 340 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 CD52P31358 61 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 TCF7P36402 384 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 LINC00310P59036 64 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 NUCB1Q02818 461 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 PTH1RQ03431 593 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 GRIN1Q05586 938 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 TROAPQ12815 778 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 TRDNQ13061 729 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 TRAF1Q13077 416 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 PIN1Q13526 163 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 SMAD2Q15796 467 aaKnown RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 MARCH8Q5T0T0 291 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 CPZQ66K79 652 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 SMC5Q8IY18 1101 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 KIAA1958Q8N8K9 716 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 SPPL3Q8TCT6 385 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 APBB2Q92870 758 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 GLG1Q92896 1179 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 SLC5A5Q92911 643 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 C11orf84Q9BUA3 381 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 MYL10Q9BUA6 226 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 FAM49AQ9H0Q0 323 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 AGO3Q9H9G7 860 aaKnown RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 PCDH18Q9HCL0 1135 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 TCEAL9Q9UHQ7 104 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 ZNF215Q9UL58 517 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 NRCAMQ92823 1304 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 LOXHD1Q8IVV2 1947 aa5.87□□□□□ -1.47
PTCD3-219ENST00000494323 ZFHX2Q9C0A1 2572 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-219ENST00000494323 MYOCOSA0A1B0GUC4 107 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 hCG_1642624A0A1W2PR95 340 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 PRAMEF25A6NGN4 478 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 E7EWF7 191 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 MEIS2O14770 477 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 PER2O15055 1255 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 NUAK1O60285 661 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 TBX10O75333 385 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 ULK1O75385 1050 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 STAM2O75886 525 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 FBXO21O94952 628 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 C4BPAP04003 597 aaKnown RBP5.86□□□□□ -1.47
PTCD3-219ENST00000494323 ITGB1P05556 798 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 INSRRP14616 1297 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 SDHAP31040 664 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 NRIP1P48552 1158 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 FNTBP49356 437 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 NT5C2P49902 561 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 GATMP50440 423 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 KIF11P52732 1056 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 TBX4P57082 545 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 DLG4P78352 724 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 PPFIA1Q13136 1202 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 WTAPQ15007 396 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 PPP2R5AQ15172 486 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 FBXO47Q5MNV8 452 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 LCNL1Q6ZST4 164 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 CATIPQ7Z7H3 387 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 ADGRD2Q7Z7M1 963 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 RSPH3Q86UC2 560 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms