RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 ABLIM1O14639 778 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 SHOXO15266 292 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 B4GALT5O43286 388 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 USO1O60763 962 aaKnown RBP8.35□□□□□ -1.07
LRCH3-218ENST00000493726 SEMA7AO75326 666 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 CTSAP10619 480 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 HOXB8P17481 243 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-218ENST00000493726 PROZP22891 400 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 PBX3P40426 434 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 NRIP1P48552 1158 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 SLC11A1P49279 550 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 ALDH7A1P49419 539 aaKnown RBP8.35□□□□□ -1.07
LRCH3-218ENST00000493726 EFNA5P52803 228 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 GIT2Q14161 759 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 HSF5Q4G112 596 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-218ENST00000493726 TMEM119Q4V9L6 283 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 XKR4Q5GH76 650 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 C1orf186Q6ZWK4 172 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 KCNK18Q7Z418 384 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 BRAPQ7Z569 592 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 ZNF280BQ86YH2 543 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 COLGALT2Q8IYK4 626 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 THNSL1Q8IYQ7 743 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 KIFAP3Q92845 792 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 AK8Q96MA6 479 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 FERD3LQ96RJ6 166 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 C1QTNF1Q9BXJ1 281 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 RAB34Q9BZG1 259 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 C2orf40Q9H1Z8 148 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 C17orf75Q9HAS0 396 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 MARCH5Q9NX47 278 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 ERVK13-1Q9NX77 482 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 CLDND1Q9NY35 253 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 KCND2Q9NZV8 630 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 DNAJB4Q9UDY4 337 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 PUF60Q9UHX1 559 aaKnown RBP8.35□□□□□ -1.07
LRCH3-218ENST00000493726 CD207Q9UJ71 328 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 PPT2Q9UMR5 302 aa8.35□□□□□ -1.07
LRCH3-218ENST00000493726 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-218ENST00000493726 PHLPP2Q6ZVD8 1323 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 A0A087WWV3 80 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 ARL5CA6NH57 179 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 PP2D1A8MPX8 630 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 INO80B-WBP1J3KQ70 363 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 ERLIN2O94905 339 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 BMP15O95972 392 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 ATP2B1P20020 1258 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SCP2P22307 547 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 CCT6AP40227 531 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SLC12A3P55017 1021 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 KRT17Q04695 432 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SMC1AQ14683 1233 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SSPNQ14714 243 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 PPP2R5AQ15172 486 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 PTPN14Q15678 1187 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 RINT1Q6NUQ1 792 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 PPFIBP1Q86W92 1011 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SYT2Q8N9I0 419 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 LRRC15Q8TF66 581 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 SLC22A17Q8WUG5 538 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 TCF25Q9BQ70 676 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 BHMT2Q9H2M3 363 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 NXF3Q9H4D5 531 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 PDZD7Q9H5P4 517 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 TLE6Q9H808 572 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 RXFP1Q9HBX9 757 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 DDX19AQ9NUU7 478 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 MIOSQ9NXC5 875 aa8.34□□□□□ -1.07
LRCH3-218ENST00000493726 CNOT6Q9ULM6 557 aaKnown RBP8.34□□□□□ -1.07
LRCH3-218ENST00000493726 TDRD15B5MCY1 1934 aaKnown RBP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ARHGEF35A5YM69 484 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 TMEM189-UBE2V1I3L0A0 370 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 PTGESO14684 152 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 NRP1O14786 923 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 CLASP2O75122 1294 aaKnown RBP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ZC3H11AO75152 810 aaKnown RBP eCLIP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ZNF205O95201 554 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 SOD2P04179 222 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ITGA4P13612 1032 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 VAV1P15498 845 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 NPTX2P47972 431 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ZNF131P52739 623 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 NCBP1Q09161 790 aaKnown RBP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 GRIK3Q13003 919 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 PTPAQ15257 358 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 HERC4Q5GLZ8 1057 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 TMEM31Q5JXX7 168 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 NT5DC1Q5TFE4 455 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 KRT79Q5XKE5 535 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ANKRD54Q6NXT1 300 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 ALKAL1Q6UXT8 129 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 URGCPQ8TCY9 931 aa8.33□□□□□ -1.08
LRCH3-218ENST00000493726 SNX21Q969T3 373 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms