RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 PHC3Q8NDX5 983 aa16.28■□□□□ 0.2
CACUL1-206ENST00000493518 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
CACUL1-206ENST00000493518 SRPK1Q96SB4 655 aaKnown RBP16.28■□□□□ 0.2
CACUL1-206ENST00000493518 I3L4J1 428 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 LYPLA1O75608 230 aaPredicted RBP16.27■□□□□ 0.2
CACUL1-206ENST00000493518 SORBS2O94875 1100 aaKnown RBP16.27■□□□□ 0.2
CACUL1-206ENST00000493518 LYPLA2O95372 231 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 ABCG1P45844 678 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 KRT81Q14533 505 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 SLC45A4Q5BKX6 768 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 CFAP157Q5JU67 520 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 C15orf39Q6ZRI6 1047 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.2
CACUL1-206ENST00000493518 MRIQ9BWK5 157 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 MIS12Q9H081 205 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 DCLRE1BQ9H816 532 aa16.27■□□□□ 0.2
CACUL1-206ENST00000493518 CCDC78A2IDD5 438 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 ABHD2P08910 425 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 KDELR1P24390 212 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 GRIA1P42261 906 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 BST1Q10588 318 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 PARP6Q2NL67 630 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 C1orf146Q5VVC0 180 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 TRIM72Q6ZMU5 477 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 TREML1Q86YW5 311 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 EBF4Q9BQW3 602 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 SHOC2Q9UQ13 582 aa16.27■□□□□ 0.19
CACUL1-206ENST00000493518 PDE5AO76074 875 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ETS2P15036 469 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ATP6V1C1P21283 382 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 PHKA2P46019 1235 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 CAPSQ13938 189 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 DPYSL3Q14195 570 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ZC3H12AQ5D1E8 599 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 XKR3Q5GH77 459 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 EFHC2Q5JST6 749 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 TRMT10BQ6PF06 316 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 TEX9Q8N6V9 391 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 DCAKDQ8WVC6 231 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 TWNKQ96RR1 684 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 C2CD2Q9Y426 696 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 MRPL42Q9Y6G3 142 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 CXCL8P10145 99 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 TBXAS1P24557 533 aaPredicted RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 SKIV2L2P42285 1042 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 KLHL38Q2WGJ6 581 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 CES3Q6UWW8 571 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 LRRC74BQ6ZQY2 392 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 NUDCD3Q8IVD9 361 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 NDUFAF2Q8N183 169 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 BANPQ8N9N5 519 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 PYDC1Q8WXC3 89 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 INPP5DQ92835 1189 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 OXNAD1Q96HP4 312 aaPredicted RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 WRNIP1Q96S55 665 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 CGRRF1Q99675 332 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ADPGKQ9BRR6 497 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 NTPCRQ9BSD7 190 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ACSS3Q9H6R3 686 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ZC3H7BQ9UGR2 993 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 CORO1CQ9ULV4 474 aaPredicted RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 KIF13BQ9NQT8 1826 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 IQANK1A0A1B0GTG1 560 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 SLC25A3Q00325 362 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 CXCL9Q07325 125 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 MOCOSQ96EN8 888 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 SLC24A2Q9UI40 661 aa16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
CACUL1-206ENST00000493518 ZC3H11AO75152 810 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACUL1-206ENST00000493518 ERBB2P04626 1255 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 KCNA4P22459 653 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 VHLP40337 213 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 ROR1Q01973 937 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 C12orf29Q8N999 325 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 SMC1BQ8NDV3 1235 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 NIF3L1Q9GZT8 377 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 A0A0B4J269 797 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 PSMG1O95456 288 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 RBL1P28749 1068 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 CCDC15Q0P6D6 951 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 AMHR2Q16671 573 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 NAT8LQ8N9F0 302 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 RBM15BQ8NDT2 890 aaKnown RBP16.25■□□□□ 0.19
CACUL1-206ENST00000493518 SLC35B2Q8TB61 432 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 FAM49BQ9NUQ9 324 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
CACUL1-206ENST00000493518 PPP1R12AO14974 1030 aaPredicted RBP16.24■□□□□ 0.19
CACUL1-206ENST00000493518 SAT1P21673 171 aa16.24■□□□□ 0.19
CACUL1-206ENST00000493518 GTF2A2P52657 109 aa16.24■□□□□ 0.19
CACUL1-206ENST00000493518 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
CACUL1-206ENST00000493518 IZUMO2Q6UXV1 221 aa16.24■□□□□ 0.19
CACUL1-206ENST00000493518 KBTBD2Q8IY47 623 aa16.24■□□□□ 0.19
CACUL1-206ENST00000493518 SCOCQ9UIL1 159 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms