RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 KLHL40Q2TBA0 621 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 UVSSAQ2YD98 709 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 RTP2Q5QGT7 225 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 SAMD5Q5TGI4 173 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 FAM171A1Q5VUB5 890 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 C19orf48Q6RUI8 117 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 CYP26C1Q6V0L0 522 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 SV2AQ7L0J3 742 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 USP37Q86T82 979 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 NLRP8Q86W28 1048 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 APPL2Q8NEU8 664 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 CMASQ8NFW8 434 aaPredicted RBP7.23□□□□□ -1.25
VPS52-219ENST00000493379 VN1R2Q8NFZ6 395 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 ZNF461Q8TAF7 563 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 TAF4BQ92750 862 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 EMILIN2Q9BXX0 1053 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 S1PR5Q9H228 398 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 FAM124BQ9H5Z6 455 aaPredicted RBP7.23□□□□□ -1.25
VPS52-219ENST00000493379 TLE6Q9H808 572 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 METTL14Q9HCE5 456 aaKnown RBP7.23□□□□□ -1.25
VPS52-219ENST00000493379 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 HSFX1Q9UBD0 423 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 AK5Q9Y6K8 562 aa7.23□□□□□ -1.25
VPS52-219ENST00000493379 TRIP11Q15643 1979 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 KIAA1671Q9BY89 1806 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 CITO14578 2027 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 LRRC10BA6NIK2 292 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SLC30A4O14863 429 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 AXIN1O15169 862 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 XYLBO75191 536 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TACC1O75410 805 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 VNN1O95497 513 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 GNA14O95837 355 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 PRB1P04280 392 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 URODP06132 367 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 ASGR2P07307 311 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SP9P0CG40 484 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TKTP29401 623 aaKnown RBP7.22□□□□□ -1.25
VPS52-219ENST00000493379 HOXA9P31269 272 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TAF6P49848 677 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 GUCY2FP51841 1108 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 DLG4P78352 724 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 RBM10P98175 930 aaKnown RBP7.22□□□□□ -1.25
VPS52-219ENST00000493379 TFAMQ00059 246 aaKnown RBP7.22□□□□□ -1.25
VPS52-219ENST00000493379 PPP3CAQ08209 521 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SMARCB1Q12824 385 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 BFSP1Q12934 665 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 PAK1Q13153 545 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.22□□□□□ -1.25
VPS52-219ENST00000493379 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS52-219ENST00000493379 PKDCCQ504Y2 493 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TPGS2Q68CL5 300 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SYCE2Q6PIF2 218 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 RSPO2Q6UXX9 243 aaPredicted RBP7.22□□□□□ -1.25
VPS52-219ENST00000493379 FAM186BQ8IYM0 893 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TMEM86AQ8N2M4 240 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 PGBD3Q8N328 593 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TMEM130Q8N3G9 435 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 CSGALNACT2Q8N6G5 542 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TOP6BLQ8N6T0 577 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
VPS52-219ENST00000493379 MICAL1Q8TDZ2 1067 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 NELFBQ8WX92 580 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SUSD6Q92537 303 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 RABGGTAQ92696 567 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SLC35C1Q96A29 364 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 CCDC74AQ96AQ1 378 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 ANKRD36BP1Q96IX9 119 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 SENP8Q96LD8 212 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 ZNF560Q96MR9 790 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 FNBP1Q96RU3 617 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TSG101Q99816 390 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 RTP3Q9BQQ7 232 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 FUCA2Q9BTY2 467 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 LSM14BQ9BX40 385 aaKnown RBP7.22□□□□□ -1.25
VPS52-219ENST00000493379 MTMR12Q9C0I1 747 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 PLEKHA4Q9H4M7 779 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 DPP7Q9UHL4 492 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 DSEQ9UL01 958 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 AGAP1Q9UPQ3 857 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 HCFC2Q9Y5Z7 792 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 ITPR3Q14573 2671 aa7.22□□□□□ -1.25
VPS52-219ENST00000493379 TDRD15B5MCY1 1934 aaKnown RBP7.21□□□□□ -1.25
VPS52-219ENST00000493379 CFAP46Q8IYW2 2715 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.21□□□□□ -1.26
VPS52-219ENST00000493379 TRIM49BA6NDI0 452 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 OR6C75A6NL08 312 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 H7C4K7 107 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 BIN1O00499 593 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 PER2O15055 1255 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 P4HA2O15460 535 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 STX10O60499 249 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 PHACTR2O75167 634 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 FGFR1OPO95684 399 aaKnown RBP7.21□□□□□ -1.26
VPS52-219ENST00000493379 ASS1P00966 412 aaKnown RBP7.21□□□□□ -1.26
VPS52-219ENST00000493379 TNNC2P02585 160 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 ITGB3P05106 788 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 TMEM191BP0C7N4 346 aa7.21□□□□□ -1.26
VPS52-219ENST00000493379 EPB41P11171 864 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms