RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TLK2Q86UE8 772 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FAM124AQ86V42 546 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MICU3Q86XE3 530 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RFX6Q8HWS3 928 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DENND1CQ8IV53 801 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ITPRIPQ8IWB1 547 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MCEMP1Q8IX19 187 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DNAJC10Q8IXB1 793 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TUSC5Q8IXB3 177 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SRBD1Q8N5C6 995 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CELF5Q8N6W0 485 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MRPL43Q8N983 215 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 HIPK4Q8NE63 616 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GLIS3Q8NEA6 775 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GSTCDQ8NEC7 633 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DNAJB8Q8NHS0 232 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PHOSPHO2Q8TCD6 241 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LRTOMTQ8WZ04 291 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 INPP5DQ92835 1189 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DDX17Q92841 729 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 VPS33AQ96AX1 596 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TMEM169Q96HH4 297 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FEM1CQ96JP0 617 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PPP1R10Q96QC0 940 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 WRNIP1Q96S55 665 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PKP4Q99569 1192 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 METTL22Q9BUU2 404 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 C9orf16Q9BUW7 83 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EDEM2Q9BV94 578 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 OXCT2Q9BYC2 517 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PUS3Q9BZE2 481 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ZNF518BQ9C0D4 1074 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EPN3Q9H201 632 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DPH5Q9H2P9 285 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 AZI2Q9H6S1 392 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KCNK13Q9HB14 408 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NTN4Q9HB63 628 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EIF2B3Q9NR50 452 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 POLE3Q9NRF9 147 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 POLR3BQ9NW08 1133 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TRPS1Q9UHF7 1281 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MAD2L2Q9UI95 211 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ZNF215Q9UL58 517 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PADI4Q9UM07 663 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SATB2Q9UPW6 733 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SNX9Q9Y5X1 595 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NPFFR2Q9Y5X5 522 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CYP46A1Q9Y6A2 500 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 WASF2Q9Y6W5 498 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 UQCRHLA0A096LP55 91 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 A0A1B0GUA9 196 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 hCG_1809904A0A1W2PP81 198 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 A0A1W2PPE2 198 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 A0A1W2PR64 198 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 CCDC151A5D8V7 595 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ZSCAN5BA6NJL1 495 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 A8MXE2 369 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ZNF879B4DU55 563 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 E9PBE3 544 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 GTPBP1O00178 669 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ADAM20O43506 726 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 GPRIN2O60269 458 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 LILRB5O75023 590 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 GADD45BO75293 160 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 SPAG6O75602 509 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TPOP07202 933 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 UQCRHP07919 91 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PABPC4LP0CB38 370 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ZNF865P0CJ78 1059 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 JUPP14923 745 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PLCG1P19174 1290 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 CHRM3P20309 590 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TNFRSF8P28908 595 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 IGFALSP35858 605 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ADCY8P40145 1251 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 GP5P40197 560 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 CCT6AP40227 531 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 BUD31P41223 144 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 POU3F4P49335 361 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 AMPHP49418 695 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 VBP1P61758 197 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PSMC6P62333 389 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 RPS26P62854 115 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TPM4P67936 248 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TUBA4AP68366 448 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ATP8B2P98198 1209 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 DSG1Q02413 1049 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 NIPAL4Q0D2K0 466 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 NNTQ13423 1086 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 KCNC3Q14003 757 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ACAP2Q15057 778 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 HFEQ30201 348 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 EFHC1Q5JVL4 640 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TBCELQ5QJ74 424 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 BEND6Q5SZJ8 279 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 MPP7Q5T2T1 576 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PIK3R6Q5UE93 754 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TBC1D9BQ66K14 1250 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 VHLLQ6RSH7 139 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms