RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 INTS2Q9H0H0 1204 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 KCNH6Q9H252 994 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 FBXO44Q9H4M3 255 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 TRPC7Q9HCX4 862 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 TDP1Q9NUW8 608 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 KIAA1257Q9ULG3 409 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 TICRRQ7Z2Z1 1910 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 BEST1O76090 585 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 CKMP06732 381 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 PAEPP09466 180 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 TCF3P15923 654 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 AOC1P19801 751 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 PTMSP20962 102 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 RFX1P22670 979 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 TUBP50607 506 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 CLCN5P51795 746 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 NUBP1P53384 320 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 MLLT6P55198 1093 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 SLC8A3P57103 927 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 STARD6P59095 220 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 IFRD2Q12894 506 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 TAF10Q12962 218 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 SLC44A4Q53GD3 710 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 SGO2Q562F6 1265 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 SNX30Q5VWJ9 437 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 GBP6Q6ZN66 633 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 ENOSF1Q7L5Y1 443 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 FLCNQ8NFG4 579 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 USP13Q92995 863 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 FBXO32Q969P5 355 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 RSPRY1Q96DX4 576 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 MSANTD3Q96H12 275 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 PRRX2Q99811 253 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 THG1LQ9NWX6 298 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 NFE2L3Q9Y4A8 694 aa11.27□□□□□ -0.61
CDC42SE1-206ENST00000492796 C2orf78A6NCI8 922 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 HHLA1C9JL84 531 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARNTLO00327 626 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 OLFM2O95897 454 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 OAS1P00973 400 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 VDRP11473 427 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 GLULP15104 373 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 HDCP19113 662 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 AVPR2P30518 371 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 USP4Q13107 963 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 STILQ15468 1287 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 EXOC3L4Q17RC7 722 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 C1orf228Q6PIY5 440 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 TMEM270Q6UE05 265 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 RRAGAQ7L523 313 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARHGEF19Q8IW93 802 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 KIAA1958Q8N8K9 716 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 ANKRD52Q8NB46 1076 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 SCAMP5Q8TAC9 235 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 CSGALNACT1Q8TDX6 532 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 TUBGCP2Q9BSJ2 902 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 UBXN6Q9BZV1 441 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 SMG9Q9H0W8 520 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 TBC1D17Q9HA65 648 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 HEBP1Q9NRV9 189 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 APEX2Q9UBZ4 518 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 TSPAN16Q9UKR8 245 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARHGAP26Q9UNA1 814 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 CCL26Q9Y258 94 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 PCDHB4Q9Y5E5 795 aa11.26□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 MIA3Q5JRA6 1907 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 KANSL1LA0AUZ9 987 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZDHHC11BP0C7U3 371 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 SETSIPP0DME0 302 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 CD19P15391 556 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZNF132P52740 706 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 BCAT1P54687 386 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 VCPP55072 806 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 MFAP3P55082 362 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 SLC7A9P82251 487 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 BST2Q10589 180 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZNF77Q15935 545 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 GOLGA7BQ2TAP0 167 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 TCP11X2Q5H9J9 407 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 CC2D1AQ6P1N0 951 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZNF852Q6ZMS4 543 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 TPRG1Q6ZUI0 275 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 C11orf57Q6ZUT1 292 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARL14EPQ8N8R7 260 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 RBBP8NLQ8NC74 664 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 KAT5Q92993 513 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 KREMEN1Q96MU8 473 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms