RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ALDH1A2O94788 518 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 OAS1P00973 400 aaKnown RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 CST3P01034 146 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 PDGFRBP09619 1106 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 OPRD1P41143 372 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 TNFRSF4P43489 277 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 PXNP49023 591 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 TUBP50607 506 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 CDR1P51861 262 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 PSMC1P62191 440 aaKnown RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 TNNC1P63316 161 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 ASIC1P78348 528 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 CLDN10P78369 228 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 CYP24A1Q07973 514 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 TRPC3Q13507 836 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 BYSLQ13895 437 aaKnown RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 WDR72Q3MJ13 1102 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 SCARA3Q6AZY7 606 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 NUP93Q8N1F7 819 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 STKLD1Q8NE28 680 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 TSTD1Q8NFU3 115 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 OR6B3Q8NGW1 331 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 NOC3LQ8WTT2 800 aaKnown RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 EZH1Q92800 747 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 TNIP3Q96KP6 325 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 LSM14BQ9BX40 385 aaKnown RBP9.72□□□□□ -0.85
HDAC3-212ENST00000492407 IL37Q9NZH6 218 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 MMP17Q9ULZ9 603 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
HDAC3-212ENST00000492407 FAM92AA1XBS5 289 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 A8MXQ7 604 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 F8VP50 259 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 ADH1CP00326 375 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 RPN1P04843 607 aaKnown RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 DLATP10515 647 aaKnown RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 YWHAQP27348 245 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 PMLP29590 882 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 GRIA2P42262 883 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 USP46P62068 366 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 ZXDBP98169 803 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 DHCR24Q15392 516 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 SF3A2Q15428 464 aaKnown RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 CRY1Q16526 586 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 MDH1BQ5I0G3 518 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 LMBRD2Q68DH5 695 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 NUDT18Q6ZVK8 323 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 SLC9A9Q8IVB4 645 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 OLIG1Q8TAK6 271 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 SCFD1Q8WVM8 642 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 TAF4BQ92750 862 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 HHIPQ96QV1 700 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 PNKPQ96T60 521 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 MRPL45Q9BRJ2 306 aaKnown RBP9.71□□□□□ -0.86
HDAC3-212ENST00000492407 RNF38Q9H0F5 515 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 XYLT2Q9H1B5 865 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 PDCL3Q9H2J4 239 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 ANGPTL2Q9UKU9 493 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 CPQQ9Y646 472 aa9.71□□□□□ -0.86
HDAC3-212ENST00000492407 KHNYNO15037 678 aaKnown RBP9.7□□□□□ -0.86
HDAC3-212ENST00000492407 HCRTO43612 131 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 CAVIN2O95810 425 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 APODP05090 189 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 CYP17A1P05093 508 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 MYL1P05976 194 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 ZDHHC11BP0C7U3 371 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 P4HA1P13674 534 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 HOXC13P31276 330 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 PSEN1P49768 467 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 GAD2Q05329 585 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 TAF10Q12962 218 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 CCDC142Q17RM4 750 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 GAB4Q2WGN9 574 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 EOGTQ5NDL2 527 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 TAF3Q5VWG9 929 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 DAB2IPQ5VWQ8 1189 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 PMS2CLQ68D20 193 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 RNF43Q68DV7 783 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 RHBDF2Q6PJF5 856 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 SHC4Q6S5L8 630 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 TRMT11Q7Z4G4 463 aaKnown RBP9.7□□□□□ -0.86
HDAC3-212ENST00000492407 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 B3GALNT2Q8NCR0 500 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 SNX21Q969T3 373 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 CCDC127Q96BQ5 260 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 DHX58Q96C10 678 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 POLMQ9NP87 494 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-212ENST00000492407 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
HDAC3-212ENST00000492407 EVLQ9UI08 416 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-212ENST00000492407 CFAP45Q9UL16 551 aa9.7□□□□□ -0.86
HDAC3-212ENST00000492407 EPG5Q9HCE0 2579 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 TNFRSF10BO14763 440 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 IKBKBO14920 756 aa9.69□□□□□ -0.86
HDAC3-212ENST00000492407 HOXC11O43248 304 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms