RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 TRIM66O15016 1216 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 KIAA0391O15091 583 aaKnown RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 PRPF6O94906 941 aaKnown RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 KLF8O95600 359 aaPredicted RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 OAS1P00973 400 aaKnown RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 TNNC2P02585 160 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 TIE1P35590 1138 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 PTGER3P43115 390 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 KIR2DL1P43626 348 aaPredicted RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 LMAN2Q12907 356 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 DUOXA2Q1HG44 320 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 TRIM61Q5EBN2 209 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 EMC10Q5UCC4 262 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 RHBDF2Q6PJF5 856 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 SYT12Q8IV01 421 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 FRMD1Q8N878 549 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 DEFB124Q8NES8 71 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 WHAMMQ8TF30 809 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 SPACA7Q96KW9 195 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 C8orf48Q96LL4 319 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 CLIC6Q96NY7 704 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 TMEM74BQ9NUR3 256 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 SMPD4Q9NXE4 827 aa16.53■□□□□ 0.24
LMNB2-203ENST00000490554 MBD1Q9UIS9 605 aaPredicted RBP16.53■□□□□ 0.24
LMNB2-203ENST00000490554 ZZEF1O43149 2961 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 ZNF233A6NK53 670 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 SCAMP3O14828 347 aaKnown RBP16.52■□□□□ 0.24
LMNB2-203ENST00000490554 APODP05090 189 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 TXLNAP40222 546 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 TAF10Q12962 218 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 RESTQ13127 1097 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 SURF1Q15526 300 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 MAP7D1Q3KQU3 841 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 SPDYCQ5MJ68 293 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 EOGTQ5NDL2 527 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 CBWD2Q8IUF1 395 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 TMEFF1Q8IYR6 380 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 MMS19Q96T76 1030 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 NUSAP1Q9BXS6 441 aaKnown RBP16.52■□□□□ 0.24
LMNB2-203ENST00000490554 PANK4Q9NVE7 773 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 CFAP97Q9P2B7 532 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 NME7Q9Y5B8 376 aa16.52■□□□□ 0.24
LMNB2-203ENST00000490554 IGF2RP11717 2491 aa16.52■□□□□ 0.23
LMNB2-203ENST00000490554 MAP3K13O43283 966 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 ADAM23O75077 832 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 ADH1CP00326 375 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 ABL1P00519 1130 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 GRIA2P42262 883 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 TNFRSF4P43489 277 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 MDH1BQ5I0G3 518 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 TDRD10Q5VZ19 366 aaKnown RBP16.51■□□□□ 0.23
LMNB2-203ENST00000490554 SLC23A3Q6PIS1 610 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 CCDC73Q6ZRK6 1079 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 ARMCX6Q7L4S7 300 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 DDX42Q86XP3 938 aaKnown RBP eCLIP16.51■□□□□ 0.23
LMNB2-203ENST00000490554 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 PHTF2Q8N3S3 785 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 HMGB4Q8WW32 186 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
LMNB2-203ENST00000490554 ARHGEF4Q9NR80 690 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 TMEM30AQ9NV96 361 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
LMNB2-203ENST00000490554 CIZ1Q9ULV3 898 aaPredicted RBP16.51■□□□□ 0.23
LMNB2-203ENST00000490554 PTPRDP23468 1912 aa16.51■□□□□ 0.23
LMNB2-203ENST00000490554 HELZP42694 1942 aaKnown RBP16.51■□□□□ 0.23
LMNB2-203ENST00000490554 ASPMQ8IZT6 3477 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 ASCC3Q8N3C0 2202 aaKnown RBP16.5■□□□□ 0.23
LMNB2-203ENST00000490554 A0A087X0B3 334 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.5■□□□□ 0.23
LMNB2-203ENST00000490554 TACC1O75410 805 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 FAM163BP0C2L3 166 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 ADH5P11766 374 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 ENGP17813 658 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 GNL1P36915 607 aaPredicted RBP16.5■□□□□ 0.23
LMNB2-203ENST00000490554 DPP6P42658 865 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 MAPK8P45983 427 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 CACNA2D1P54289 1103 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 KDSRQ06136 332 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 BYSLQ13895 437 aaKnown RBP16.5■□□□□ 0.23
LMNB2-203ENST00000490554 PEAR1Q5VY43 1037 aaPredicted RBP16.5■□□□□ 0.23
LMNB2-203ENST00000490554 LYSMD4Q5XG99 296 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 TRAPPC11Q7Z392 1133 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 SLITRK1Q96PX8 696 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 SLC32A1Q9H598 525 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 ZDHHC4Q9NPG8 344 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 TBC1D14Q9P2M4 693 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 SPEGQ15772 3267 aa16.5■□□□□ 0.23
LMNB2-203ENST00000490554 TCRBV21S2A2A0A5A6 115 aa16.49■□□□□ 0.23
LMNB2-203ENST00000490554 E2F8A0AVK6 867 aa16.49■□□□□ 0.23
LMNB2-203ENST00000490554 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
LMNB2-203ENST00000490554 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
LMNB2-203ENST00000490554 UPK3BL1B0FP48 263 aa16.49■□□□□ 0.23
LMNB2-203ENST00000490554 UPK3BL2E5RIL1 263 aa16.49■□□□□ 0.23
LMNB2-203ENST00000490554 CST3P01034 146 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms