RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 CHORDC1Q9UHD1 332 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-214ENST00000490398 NDRG2Q9UN36 371 aaKnown RBP19.22■□□□□ 0.67
COL9A3-214ENST00000490398 CACNA1HO95180 2353 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 TRAV19A0A0A6YYK7 116 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 BICDL2A1A5D9 508 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 SOBPA7XYQ1 873 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 HHLA1C9JL84 531 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 ABL1P00519 1130 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 ARSAP15289 507 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 HDCP19113 662 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 YWHAQP27348 245 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 CUL2Q13617 745 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 ZNF77Q15935 545 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 PPP1R26Q5T8A7 1209 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-214ENST00000490398 ZNF852Q6ZMS4 543 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 UBR7Q8N806 425 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 LMO3Q8TAP4 145 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 GPT2Q8TD30 523 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 CHFRQ96EP1 664 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 ATP8B3O60423 1300 aa19.21■□□□□ 0.67
COL9A3-214ENST00000490398 USP17L7P0C7H9 530 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 NUBP1P53384 320 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 USP4Q13107 963 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-214ENST00000490398 IRF2BP1Q8IU81 584 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 CSGALNACT1Q8TDX6 532 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 SH3RF2Q8TEC5 729 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 FBXO32Q969P5 355 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
COL9A3-214ENST00000490398 PRRX2Q99811 253 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 EBF3Q9H4W6 596 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 GMIPQ9P107 970 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 RWDD2AQ9UIY3 292 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 ZMYM5Q9UJ78 669 aa19.2■□□□□ 0.66
COL9A3-214ENST00000490398 FAM92AA1XBS5 289 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 SCAMP3O14828 347 aaKnown RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 OLFM2O95897 454 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 OAS1P00973 400 aaKnown RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 CALCAP01258 141 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 FAM200BP0CF97 657 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 KPNA1P52294 538 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 MARSP56192 900 aaKnown RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 KCNH2Q12809 1159 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 MTF1Q14872 753 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 ANGPT1Q15389 498 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 DPCR1Q3MIW9 517 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 NAIF1Q69YI7 327 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 ARHGEF19Q8IW93 802 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 MAML2Q8IZL2 1156 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 FAM3CQ92520 227 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 CLDN23Q96B33 292 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 TMEM176AQ96HP8 235 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 HEXIM2Q96MH2 286 aaKnown RBP19.19■□□□□ 0.66
COL9A3-214ENST00000490398 NUP62CLQ9H1M0 184 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 LINC00597Q9H2U6 94 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 WNT6Q9Y6F9 365 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 ANAPC1Q9H1A4 1944 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 F5P12259 2224 aa19.19■□□□□ 0.66
COL9A3-214ENST00000490398 KIF26AQ9ULI4 1882 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-214ENST00000490398 SPECC1L-ADORA2AF8WAN1 911 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 RTN3O95197 1032 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-214ENST00000490398 ACO1P21399 889 aaKnown RBP19.18■□□□□ 0.66
COL9A3-214ENST00000490398 ATOH1Q92858 354 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-214ENST00000490398 FAXDC2Q96IV6 333 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 SLITRK1Q96PX8 696 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 OSBPL6Q9BZF3 934 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 CCSER2Q9H7U1 834 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 RBM12Q9NTZ6 932 aaKnown RBP19.18■□□□□ 0.66
COL9A3-214ENST00000490398 THG1LQ9NWX6 298 aaKnown RBP19.18■□□□□ 0.66
COL9A3-214ENST00000490398 SMPD4Q9NXE4 827 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 ARHGAP26Q9UNA1 814 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 CPQQ9Y646 472 aa19.18■□□□□ 0.66
COL9A3-214ENST00000490398 RNF225M0QZC1 329 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-214ENST00000490398 LEFTY2O00292 366 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 MAN2B1O00754 1011 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 PMM2O15305 246 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 ZDHHC11BP0C7U3 371 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 CTHP32929 405 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 PLCB2Q00722 1185 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 TTC30AQ86WT1 665 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 MLKLQ8NB16 471 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 WBP2Q969T9 261 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 CNOT6LQ96LI5 555 aaKnown RBP19.17■□□□□ 0.66
COL9A3-214ENST00000490398 NMUR1Q9HB89 426 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 OSER1Q9NX31 292 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 EHD2Q9NZN4 543 aa19.17■□□□□ 0.66
COL9A3-214ENST00000490398 TULP2O00295 520 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 CYP26A1O43174 497 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 COCHO43405 550 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 GNA14O95837 355 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 TBX18O95935 607 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 AFPP02771 609 aaKnown RBP19.16■□□□□ 0.66
COL9A3-214ENST00000490398 CHRNB1P11230 501 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 SLC7A9P82251 487 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 RUNX3Q13761 415 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 GAS6Q14393 721 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 ITPRIPL2Q3MIP1 535 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 ARHGAP17Q68EM7 881 aa19.16■□□□□ 0.66
COL9A3-214ENST00000490398 RRAGAQ7L523 313 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms