RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 MUL1Q969V5 352 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 FAM227BQ96M60 508 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.67□□□□□ -1.66
CD46-216ENST00000490278 ZCWPW1Q9H0M4 648 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 GLOD4Q9HC38 313 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 ZBTB26Q9HCK0 441 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 SYBUQ9NX95 663 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 RGL1Q9NZL6 768 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 SLC39A10Q9ULF5 831 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 ARID4BQ4LE39 1312 aaPredicted RBP4.67□□□□□ -1.66
CD46-216ENST00000490278 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 IFRD1O00458 451 aaPredicted RBP4.66□□□□□ -1.66
CD46-216ENST00000490278 FFAR2O15552 330 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 COQ9O75208 318 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 ESRRBO95718 433 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 HGFP14210 728 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 TACR2P21452 398 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 EPHA3P29320 983 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 UQCRC1P31930 480 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 ALDH9A1P49189 494 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 PGDP52209 483 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 FSTL1Q12841 308 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 MPP3Q13368 585 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 TXNRD1Q16881 649 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 FAM83BQ5T0W9 1011 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 MANEALQ5VSG8 457 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 KAZNQ674X7 775 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 KIAA0895LQ68EN5 471 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 MRNIPQ6NTE8 343 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 PGBD2Q6P3X8 592 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 Q6YL49 198 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 MAVSQ7Z434 540 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 ULK2Q8IYT8 1036 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 ZNF527Q8NB42 609 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 SUPT20HQ8NEM7 779 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 LARP4BQ92615 738 aaKnown RBP4.66□□□□□ -1.66
CD46-216ENST00000490278 GLG1Q92896 1179 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 PBKQ96KB5 322 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 C17orf80Q9BSJ5 609 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 INO80BQ9C086 356 aaPredicted RBP4.66□□□□□ -1.66
CD46-216ENST00000490278 PCDHAC1Q9H158 963 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 SLC25A32Q9H2D1 315 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 NECTIN3Q9NQS3 549 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 EHD3Q9NZN3 535 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 DNAJB11Q9UBS4 358 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 ZMYND8Q9ULU4 1186 aaPredicted RBP4.66□□□□□ -1.66
CD46-216ENST00000490278 USP22Q9UPT9 525 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 EPN1Q9Y6I3 576 aaPredicted RBP4.66□□□□□ -1.66
CD46-216ENST00000490278 COL4A3Q01955 1670 aa4.66□□□□□ -1.66
CD46-216ENST00000490278 A1L4Q6 167 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 GRID2IPA4D2P6 1211 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 GOLGA6L3A6NEY3 463 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ZAR1LA6NP61 321 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 VWC2LB2RUY7 222 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ADM5C9JUS6 153 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 FZD7O75084 574 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 EIF3JO75822 258 aaKnown RBP4.65□□□□□ -1.67
CD46-216ENST00000490278 NXPH3O95157 252 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ONECUT2O95948 504 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ERBB2P04626 1255 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 C6P13671 934 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 EGR1P18146 543 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 MPLP40238 635 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 TRAPPC10P48553 1259 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 GATMP50440 423 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 SEC24CP53992 1094 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 MRPS35P82673 323 aaKnown RBP4.65□□□□□ -1.67
CD46-216ENST00000490278 TIAL1Q01085 375 aaKnown RBP eCLIP4.65□□□□□ -1.67
CD46-216ENST00000490278 ICA1Q05084 483 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 RAB30Q15771 203 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 MAPKAPK3Q16644 382 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 LY6KQ17RY6 165 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 SLC5A9Q2M3M2 681 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 GRAMD1BQ3KR37 738 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.65□□□□□ -1.67
CD46-216ENST00000490278 TREML2Q5T2D2 321 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 FAXCQ5TGI0 409 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 SLC9A4Q6AI14 798 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 USP49Q70CQ1 688 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ZNF627Q7L945 461 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 CCDC28AQ8IWP9 274 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 NEU4Q8WWR8 484 aaPredicted RBP4.65□□□□□ -1.67
CD46-216ENST00000490278 SOCS4Q8WXH5 440 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 TFAP2BQ92481 460 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 RFKQ969G6 155 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 C18orf8Q96DM3 657 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ZDHHC12Q96GR4 267 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 ZBTB45Q96K62 511 aaPredicted RBP4.65□□□□□ -1.67
CD46-216ENST00000490278 HIST1H2AAQ96QV6 131 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 PRRX2Q99811 253 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 PTPRHQ9HD43 1115 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 TMOD4Q9NZQ9 345 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 DKK3Q9UBP4 350 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 SH2B3Q9UQQ2 575 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 HS3ST3A1Q9Y663 406 aa4.65□□□□□ -1.67
CD46-216ENST00000490278 TMEM191CA6NGB0 347 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 CCNT2O60583 730 aaKnown RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 SNX2O60749 519 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 SKAP2O75563 359 aaPredicted RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 TCEA3O75764 348 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms