RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 VSTM1Q6UX27 236 aa8.78□□□□□ -1
USP39-216ENST00000490193 LIMS2Q7Z4I7 341 aa8.78□□□□□ -1
USP39-216ENST00000490193 OSTM1Q86WC4 334 aa8.78□□□□□ -1
USP39-216ENST00000490193 SPATA2LQ8IUW3 424 aaPredicted RBP8.78□□□□□ -1
USP39-216ENST00000490193 BRSK2Q8IWQ3 736 aa8.78□□□□□ -1
USP39-216ENST00000490193 ADGRG2Q8IZP9 1017 aa8.78□□□□□ -1
USP39-216ENST00000490193 TOP6BLQ8N6T0 577 aa8.78□□□□□ -1
USP39-216ENST00000490193 IL17RCQ8NAC3 791 aa8.78□□□□□ -1
USP39-216ENST00000490193 WHAMMQ8TF30 809 aa8.78□□□□□ -1
USP39-216ENST00000490193 RAD54LQ92698 747 aa8.78□□□□□ -1
USP39-216ENST00000490193 SPACA7Q96KW9 195 aa8.78□□□□□ -1
USP39-216ENST00000490193 TTLL2Q9BWV7 592 aa8.78□□□□□ -1
USP39-216ENST00000490193 POLMQ9NP87 494 aaPredicted RBP8.78□□□□□ -1
USP39-216ENST00000490193 TMEM74BQ9NUR3 256 aa8.78□□□□□ -1
USP39-216ENST00000490193 PILRBQ9UKJ0 227 aa8.78□□□□□ -1
USP39-216ENST00000490193 KLK13Q9UKR3 277 aa8.78□□□□□ -1
USP39-216ENST00000490193 ITGA11Q9UKX5 1188 aa8.78□□□□□ -1
USP39-216ENST00000490193 AGAP1Q9UPQ3 857 aa8.78□□□□□ -1
USP39-216ENST00000490193 KIF3AQ9Y496 699 aa8.78□□□□□ -1
USP39-216ENST00000490193 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1
USP39-216ENST00000490193 IGSF10Q6WRI0 2623 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 SGK1O00141 431 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 LEFTY2O00292 366 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 PLCG1P19174 1290 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 ACAT1P24752 427 aaKnown RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 UBA7P41226 1012 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 PTGER3P43115 390 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 PPP3CCP48454 512 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 SEC13P55735 322 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 WNT7BP56706 349 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 DHX8Q14562 1220 aaKnown RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 MCM6Q14566 821 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 CCDC142Q17RM4 750 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 EOGTQ5NDL2 527 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 LYSMD4Q5XG99 296 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 KIAA1211LQ6NV74 962 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 C4orf50Q6ZRC1 276 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 DPH6Q7L8W6 267 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 ZNF720Q7Z2F6 126 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 RABEPKQ7Z6M1 372 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 FILIP1Q7Z7B0 1213 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 TMEFF1Q8IYR6 380 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 CCDC33Q8N5R6 958 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 ALLCQ8N6M5 410 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 TXNDC5Q8NBS9 432 aaKnown RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 CEP76Q8TAP6 659 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 CACTINQ8WUQ7 758 aaKnown RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 RLN3Q8WXF3 142 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 POMGNT1Q8WZA1 660 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 LARP4BQ92615 738 aaKnown RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 PNKPQ96T60 521 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 CAPN10Q9HC96 672 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 RYDENQ9NUL5 291 aaKnown RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 EHD2Q9NZN4 543 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 SEL1LQ9UBV2 794 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 MBD1Q9UIS9 605 aaPredicted RBP8.77□□□□□ -1.01
USP39-216ENST00000490193 GON4LQ3T8J9 2241 aa8.77□□□□□ -1.01
USP39-216ENST00000490193 SPAARA0A1B0GVQ0 90 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 MYMKA6NI61 221 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 ADAM23O75077 832 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 KAT7O95251 611 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 KLF8O95600 359 aaPredicted RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 OAS1P00973 400 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 APODP05090 189 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 KRT18P05783 430 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 SERPINF2P08697 491 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 GARTP22102 1010 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 RDXP35241 583 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 LONP1P36776 959 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 TNFRSF4P43489 277 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 MAPK8P45983 427 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 NOP14P78316 857 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 SIM1P81133 766 aaPredicted RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 TFAMQ00059 246 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 MESP2Q0VG99 397 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 HNRNPDQ14103 355 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 DHCR24Q15392 516 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 MAPRE1Q15691 268 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 DUOXA1Q1HG43 343 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 ZNF423Q2M1K9 1284 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 SOWAHAQ2M3V2 549 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 DENND5BQ6ZUT9 1274 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 PROSER1Q86XN7 944 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 SCN4BQ8IWT1 228 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 ADGRF2Q8IZF7 708 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 PHTF2Q8N3S3 785 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 TTC16Q8NEE8 873 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 KCNV2Q8TDN2 545 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 KBTBD7Q8WVZ9 684 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 DUSP9Q99956 384 aaKnown RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 FAM213AQ9BRX8 229 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 IKZF4Q9H2S9 585 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 ZHX3Q9H4I2 956 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 RBAKQ9NYW8 714 aaPredicted RBP8.76□□□□□ -1.01
USP39-216ENST00000490193 TRPM5Q9NZQ8 1165 aa8.76□□□□□ -1.01
USP39-216ENST00000490193 SIX4Q9UIU6 781 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms