RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 M0R3H8 397 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 MOSPD3O75425 235 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 MYBP10242 640 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 FPR3P25089 353 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 GKP32189 559 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 RENBPP51606 427 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 CCNIQ14094 377 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 DAZAP2Q15038 168 aaPredicted RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 ETFDHQ16134 617 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 PTCHD3Q3KNS1 767 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 ODR4Q5SWX8 454 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 DPY19L3Q6ZPD9 716 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 SFTPA1Q8IWL2 248 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 RAVER1Q8IY67 606 aaKnown RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 MPP5Q8N3R9 675 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 OR56A3Q8NH54 315 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 TRIM43Q96BQ3 446 aaPredicted RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 C5orf34Q96MH7 638 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 TRIM5Q9C035 493 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 CIPCQ9C0C6 399 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 GBA2Q9HCG7 927 aaPredicted RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 C1orf112Q9NSG2 853 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 DNMT3BQ9UBC3 853 aaKnown RBP4.7□□□□□ -1.66
HMGN1-218ENST00000490032 AMFRQ9UKV5 643 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 CDY1Q9Y6F8 540 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 USP19O94966 1318 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 ISM1B1AKI9 464 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 UBE2Q2LH0YL09 131 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 AP4M1O00189 453 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 CCP110O43303 1012 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 PRPF3O43395 683 aaKnown RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 MARCH6O60337 910 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 EXOC3O60645 756 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 PMPCBO75439 489 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 BCAR3O75815 825 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 USP1O94782 785 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 TOP3BO95985 862 aaKnown RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 FGAP02671 866 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 CYP2A6P11509 494 aaPredicted RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 PSG6Q00889 435 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 CNN3Q15417 329 aaKnown RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 NFE2Q16621 373 aaPredicted RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 INSCQ1MX18 579 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 PLEKHG6Q3KR16 790 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 CERKLQ49MI3 558 aaPredicted RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 NXNQ6DKJ4 435 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 APOA5Q6Q788 366 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 ZDHHC24Q6UX98 284 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 BCDIN3DQ7Z5W3 292 aaKnown RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 RAB11FIP4Q86YS3 637 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 SPARTQ8N0X7 666 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 SIRT6Q8N6T7 355 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 C9orf106Q8NAJ2 232 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 DENND1AQ8TEH3 1009 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 SPSB4Q96A44 273 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 NMD3Q96D46 503 aaKnown RBP4.69□□□□□ -1.66
HMGN1-218ENST00000490032 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 ASIC5Q9NY37 505 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 STK32BQ9NY57 414 aa4.69□□□□□ -1.66
HMGN1-218ENST00000490032 PSMD9O00233 223 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 ITGB6P18564 788 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 KLRC1P26715 233 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 SUMO3P55854 103 aaPredicted RBP4.68□□□□□ -1.66
HMGN1-218ENST00000490032 TIAL1Q01085 375 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGN1-218ENST00000490032 MLC1Q15049 377 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 MINDY4Q4G0A6 757 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 SLC2A7Q6PXP3 512 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 ZNF813Q6ZN06 617 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 TCEAL8Q8IYN2 117 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 CHPFQ8IZ52 775 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 DNAJB14Q8TBM8 379 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 ZNF398Q8TD17 642 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 CTHRC1Q96CG8 243 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 ZC3H10Q96K80 434 aaKnown RBP4.68□□□□□ -1.66
HMGN1-218ENST00000490032 ZNF48Q96MX3 618 aaPredicted RBP4.68□□□□□ -1.66
HMGN1-218ENST00000490032 PDGFCQ9NRA1 345 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 TFCP2L1Q9NZI6 479 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 CPNE7Q9UBL6 633 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 DRG1Q9Y295 367 aaKnown RBP4.68□□□□□ -1.66
HMGN1-218ENST00000490032 TBC1D30Q9Y2I9 924 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 WDR17Q8IZU2 1322 aa4.68□□□□□ -1.66
HMGN1-218ENST00000490032 LOC102723971A0A1B0GUV8 181 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 BTBD19C9JJ37 291 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 E5RJQ4 531 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 PYCARD-AS1I3L0S3 204 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 CD3EAPO15446 510 aaKnown RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 SCGB1D2O95969 90 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 EPHA3P29320 983 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 PRKAR1BP31321 381 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 UQCRC1P31930 480 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 ALDH5A1P51649 535 aaPredicted RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 FAM187BQ17R55 369 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 SERPINA13PQ6UXR4 307 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 PTCHD4Q6ZW05 846 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 LINC01465Q8N7H1 131 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 MAGEB6Q8N7X4 407 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms