RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ARSAP15289 507 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 MTF1Q14872 753 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 C1orf228Q6PIY5 440 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 FBXL13Q8NEE6 735 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 SCAMP5Q8TAC9 235 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 WHAMMQ8TF30 809 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 SMOQ99835 787 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 PRR23AA6NEV1 266 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 PSMA7O14818 248 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 STX10O60499 249 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 BEST1O76090 585 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 CD58P19256 250 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 ZXDBP98169 803 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 RUNX3Q13761 415 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 CBWD6Q4V339 395 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 DCAF17Q5H9S7 520 aaPredicted RBP26.51■■□□□ 1.83
HMGN1-217ENST00000489072 CBWD3Q5JTY5 395 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 CBWD5Q5RIA9 395 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 TTC16Q8NEE8 873 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 SH3RF2Q8TEC5 729 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 CHFRQ96EP1 664 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 DHTKD1Q96HY7 919 aaPredicted RBP26.51■■□□□ 1.83
HMGN1-217ENST00000489072 RBM12Q9NTZ6 932 aaKnown RBP26.51■■□□□ 1.83
HMGN1-217ENST00000489072 FBXO4Q9UKT5 387 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 ARHGAP26Q9UNA1 814 aa26.51■■□□□ 1.83
HMGN1-217ENST00000489072 CILPO75339 1184 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 RTN3O95197 1032 aaPredicted RBP26.5■■□□□ 1.83
HMGN1-217ENST00000489072 PFKLP17858 780 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 YWHAQP27348 245 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 PPP3CCP48454 512 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 SLC5A3P53794 718 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 CSTF1Q05048 431 aaKnown RBP26.5■■□□□ 1.83
HMGN1-217ENST00000489072 STIM1Q13586 685 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 MORC3Q14149 939 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 PON2Q15165 354 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 TCERG1LQ5VWI1 586 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 CC2D1AQ6P1N0 951 aaPredicted RBP26.5■■□□□ 1.83
HMGN1-217ENST00000489072 CCDC150Q8NCX0 1101 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 FBXO32Q969P5 355 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 SLITRK1Q96PX8 696 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 DUSP9Q99956 384 aaKnown RBP26.5■■□□□ 1.83
HMGN1-217ENST00000489072 NT5C1AQ9BXI3 368 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 RNF38Q9H0F5 515 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 CSNK1G1Q9HCP0 422 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 RAB20Q9NX57 234 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 IL37Q9NZH6 218 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 CHMP5Q9NZZ3 219 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 CFAP54Q96N23 3096 aa26.5■■□□□ 1.83
HMGN1-217ENST00000489072 EP300Q09472 2414 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-217ENST00000489072 GVINP1Q7Z2Y8 2422 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 PPP1R3GB7ZBB8 358 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 BIN1O00499 593 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 OLFM2O95897 454 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 ABL1P00519 1130 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 OAS1P00973 400 aaKnown RBP26.49■■□□□ 1.83
HMGN1-217ENST00000489072 TCF3P15923 654 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 ADORA2BP29275 332 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 GAS6Q14393 721 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 PDGFRLQ15198 375 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 NKD2Q969F2 451 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-217ENST00000489072 PRMT8Q9NR22 394 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-217ENST00000489072 WNT6Q9Y6F9 365 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 MYO16Q9Y6X6 1858 aa26.49■■□□□ 1.83
HMGN1-217ENST00000489072 FRYLO94915 3013 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 PDE6CP51160 858 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 MAP3K7CLP57077 242 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 ZNF528Q3MIS6 628 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 KLHL10Q6JEL2 608 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 TSSK4Q6SA08 328 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 OSCP1Q8WVF1 389 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 TATDN2Q93075 761 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 SLC35C1Q96A29 364 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 HNRNPABQ99729 332 aaKnown RBP26.48■■□□□ 1.83
HMGN1-217ENST00000489072 ARID3AQ99856 593 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 DUS2Q9NX74 493 aaKnown RBP26.48■■□□□ 1.83
HMGN1-217ENST00000489072 ARMCX3Q9UH62 379 aaPredicted RBP26.48■■□□□ 1.83
HMGN1-217ENST00000489072 COQ4Q9Y3A0 265 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 ATG2BQ96BY7 2078 aa26.48■■□□□ 1.83
HMGN1-217ENST00000489072 ZNF292O60281 2723 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 SLC7A9P82251 487 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 LRRC32Q14392 662 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 TTI2Q6NXR4 508 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 OVCA2Q8WZ82 227 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 CYFIP2Q96F07 1278 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 IER2Q9BTL4 223 aa26.47■■□□□ 1.83
HMGN1-217ENST00000489072 CHORDC1Q9UHD1 332 aaPredicted RBP26.47■■□□□ 1.83
HMGN1-217ENST00000489072 GPR179Q6PRD1 2367 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 FAM92AA1XBS5 289 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 LEFTY2O00292 366 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 FAM200BP0CF97 657 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 PPP1R2P41236 205 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 CCINQ13939 588 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 EML3Q32P44 896 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 MAMSTRQ6ZN01 415 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 Q6ZS52 159 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 CLEC20AQ6ZU45 233 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 PDZD8Q8NEN9 1154 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 NELFBQ8WX92 580 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 FAXDC2Q96IV6 333 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 CEP63Q96MT8 703 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms