RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 MFSD6LQ8IWD5 586 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 CELF5Q8N6W0 485 aaKnown RBP15.92■□□□□ 0.14
CXCL12-207ENST00000488591 ANKRD52Q8NB46 1076 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 RBBP8NLQ8NC74 664 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-207ENST00000488591 ZMIZ2Q8NF64 920 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 SCAMP5Q8TAC9 235 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 PBXIP1Q96AQ6 731 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 BPIFA3Q9BQP9 254 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 UBXN6Q9BZV1 441 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 MFSD1Q9H3U5 465 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 THG1LQ9NWX6 298 aaKnown RBP15.92■□□□□ 0.14
CXCL12-207ENST00000488591 TAB2Q9NYJ8 693 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 APEX2Q9UBZ4 518 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 DENND4CQ5VZ89 1909 aa15.92■□□□□ 0.14
CXCL12-207ENST00000488591 ZNF840PA6NDX5 716 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 TADA3O75528 432 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 CKMP06732 381 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 HDCP19113 662 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 GRM2Q14416 872 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 STILQ15468 1287 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 FKBP15Q5T1M5 1219 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 VITQ6UXI7 678 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 BMP8AQ7Z5Y6 402 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 IRF7Q92985 503 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 ASIC4Q96FT7 647 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 KREMEN1Q96MU8 473 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 VPS16Q9H269 839 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 BRD9Q9H8M2 597 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 KIF9Q9HAQ2 790 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 TDP1Q9NUW8 608 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 IL37Q9NZH6 218 aa15.91■□□□□ 0.14
CXCL12-207ENST00000488591 NUP210Q8TEM1 1887 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-207ENST00000488591 MUC3AQ02505 3323 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 ZNF638Q14966 1978 aaKnown RBP15.9■□□□□ 0.14
CXCL12-207ENST00000488591 SYCE3A1L190 88 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 ZNF263O14978 683 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 RFX1P22670 979 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 GDI1P31150 447 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 BCAT1P54687 386 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 ZNF268Q14587 947 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-207ENST00000488591 KRT31Q15323 416 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 ARHGAP44Q17R89 818 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 GOLGA7BQ2TAP0 167 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 SMYD5Q6GMV2 418 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 SIX5Q8N196 739 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 AOPEPQ8N6M6 819 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 BPIFB1Q8TDL5 484 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 CYP2S1Q96SQ9 504 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 LRFN3Q9BTN0 628 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 SMG9Q9H0W8 520 aaKnown RBP15.9■□□□□ 0.14
CXCL12-207ENST00000488591 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 CHORDC1Q9UHD1 332 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-207ENST00000488591 TSPAN16Q9UKR8 245 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 CNTN6Q9UQ52 1028 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 OBSL1O75147 1896 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 NCANO14594 1321 aa15.9■□□□□ 0.14
CXCL12-207ENST00000488591 FAM92AA1XBS5 289 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 C2orf78A6NCI8 922 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 BECN2A8MW95 431 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 HHLA1C9JL84 531 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 RNF225M0QZC1 329 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 STK25O00506 426 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 MED7O43513 233 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 PRAMEF12O95522 483 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 USP8P40818 1118 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 ZNF165P49910 485 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 BST2Q10589 180 aaKnown RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 CNGA2Q16280 664 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 ARHGAP29Q52LW3 1261 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 CC2D1AQ6P1N0 951 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 LCLAT1Q6UWP7 414 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 HFE2Q6ZVN8 426 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 SUGP1Q8IWZ8 645 aaKnown RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 ARL14EPQ8N8R7 260 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 DNASE1L2Q92874 299 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 USP13Q92995 863 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 SHDQ96IW2 340 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 TLR8Q9NR97 1041 aaKnown RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 LIMA1Q9UHB6 759 aaKnown RBP15.89■□□□□ 0.13
CXCL12-207ENST00000488591 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 CA14Q9ULX7 337 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 SCML2Q9UQR0 700 aa15.89■□□□□ 0.13
CXCL12-207ENST00000488591 TECTAO75443 2155 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 O00370 1275 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 XPO1O14980 1071 aaKnown RBP15.88■□□□□ 0.13
CXCL12-207ENST00000488591 CHADO15335 359 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 SETSIPP0DME0 302 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 BRD2P25440 801 aaKnown RBP15.88■□□□□ 0.13
CXCL12-207ENST00000488591 KIF11P52732 1056 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 ZNF132P52740 706 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 PLCB2Q00722 1185 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 APBA1Q02410 837 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 FCHO2Q0JRZ9 810 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 NCAPHQ15003 741 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 SLC44A4Q53GD3 710 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 HECTD3Q5T447 861 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 SNX30Q5VWJ9 437 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 PIGZQ86VD9 579 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 TTC30AQ86WT1 665 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms