RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 PPM1NQ8N819 430 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 NSUN6Q8TEA1 469 aaKnown RBP17.09■□□□□ 0.33
GCOM1-210ENST00000488175 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SRPK1Q96SB4 655 aaKnown RBP17.09■□□□□ 0.33
GCOM1-210ENST00000488175 NIF3L1Q9GZT8 377 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 IQCGQ9H095 443 aaKnown RBP17.09■□□□□ 0.33
GCOM1-210ENST00000488175 CNTN3Q9P232 1028 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 STRIP2Q9ULQ0 834 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 TRIM49D1C9J1S8 452 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 WNT10BO00744 389 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 NPTXRO95502 500 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 PIGRP01833 764 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SUPT20HL2P0C7V6 817 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SKIP12755 728 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SLC18A2Q05940 514 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SUPT20HL1Q3ZLR7 823 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 HSF5Q4G112 596 aaPredicted RBP17.09■□□□□ 0.33
GCOM1-210ENST00000488175 IRGCQ6NXR0 463 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 KBTBD2Q8IY47 623 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 LRRN4Q8WUT4 740 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 SLC13A1Q9BZW2 595 aa17.09■□□□□ 0.33
GCOM1-210ENST00000488175 CYB561D2O14569 222 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 COPEO14579 308 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 ARL2P36404 184 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 OCRLQ01968 901 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 KDSRQ06136 332 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 TRPC3Q13507 836 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 KRT72Q14CN4 511 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 FAXCQ5TGI0 409 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 DARS2Q6PI48 645 aaKnown RBP17.08■□□□□ 0.33
GCOM1-210ENST00000488175 CPXM1Q96SM3 734 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 ZNF518BQ9C0D4 1074 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.33
GCOM1-210ENST00000488175 PAPOLBQ9NRJ5 636 aaKnown RBP17.08■□□□□ 0.33
GCOM1-210ENST00000488175 KRT82Q9NSB4 513 aa17.08■□□□□ 0.33
GCOM1-210ENST00000488175 STX18Q9P2W9 335 aaKnown RBP17.08■□□□□ 0.33
GCOM1-210ENST00000488175 CXorf49A8MYA2 514 aaPredicted RBP17.08■□□□□ 0.32
GCOM1-210ENST00000488175 ABLIM1O14639 778 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 KIF3CO14782 793 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 MCF2LO15068 1137 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 FESP07332 822 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 RXRBP28702 533 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 MIPP30301 263 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 OSTNP61366 133 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 RAB6CQ53S08 254 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 CES4AQ5XG92 561 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 OR52E8Q6IFG1 317 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 SLC30A9Q6PML9 568 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 ARID3BQ8IVW6 561 aaPredicted RBP17.08■□□□□ 0.32
GCOM1-210ENST00000488175 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 RAB6CQ9H0N0 254 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 PPARGC1AQ9UBK2 798 aaKnown RBP17.08■□□□□ 0.32
GCOM1-210ENST00000488175 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 EFR3BQ9Y2G0 817 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 C2CD2Q9Y426 696 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 TEX264Q9Y6I9 313 aa17.08■□□□□ 0.32
GCOM1-210ENST00000488175 APOC4-APOC2K7ER74 178 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 MAP3K6O95382 1288 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 APOC2P02655 101 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 OATP04181 439 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 CDH8P55286 799 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 BMPR2Q13873 1038 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 CAPSQ13938 189 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 SH3PXD2AQ5TCZ1 1133 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 FKBP1CQ5VVH2 108 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 XRRA1Q6P2D8 792 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 BRSK2Q8IWQ3 736 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.07■□□□□ 0.32
GCOM1-210ENST00000488175 PHACTR1Q9C0D0 580 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 UGT1A9O60656 530 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 ABCD1P33897 745 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 TMPRSS15P98073 1019 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 AP1B1Q10567 949 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 BST1Q10588 318 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 PPFIBP2Q8ND30 876 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 RBM15BQ8NDT2 890 aaKnown RBP17.07■□□□□ 0.32
GCOM1-210ENST00000488175 FAF2Q96CS3 445 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 ACAP3Q96P50 834 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 DDX50Q9BQ39 737 aaKnown RBP17.07■□□□□ 0.32
GCOM1-210ENST00000488175 TRIM56Q9BRZ2 755 aaKnown RBP17.07■□□□□ 0.32
GCOM1-210ENST00000488175 VCXQ9H320 206 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 QTRT2Q9H974 415 aaKnown RBP17.07■□□□□ 0.32
GCOM1-210ENST00000488175 UGT1A7Q9HAW7 530 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 UGT1A10Q9HAW8 530 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 UGT1A8Q9HAW9 530 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 SCOCQ9UIL1 159 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 ASB3Q9Y575 518 aa17.07■□□□□ 0.32
GCOM1-210ENST00000488175 PIK3R2O00459 728 aa17.06■□□□□ 0.32
GCOM1-210ENST00000488175 AHCYL1O43865 530 aa17.06■□□□□ 0.32
GCOM1-210ENST00000488175 ATG7O95352 703 aa17.06■□□□□ 0.32
GCOM1-210ENST00000488175 ERBB2P04626 1255 aa17.06■□□□□ 0.32
GCOM1-210ENST00000488175 KCNA3P22001 575 aa17.06■□□□□ 0.32
GCOM1-210ENST00000488175 CDH5P33151 784 aaPredicted RBP17.06■□□□□ 0.32
GCOM1-210ENST00000488175 PAPOLAP51003 745 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms