RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 PCED1BQ96HM7 432 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 HHIPQ96QV1 700 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 SNX25Q9H3E2 840 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 POLR3BQ9NW08 1133 aaPredicted RBP13.01□□□□□ -0.33
OPTN-212ENST00000487935 TRPM5Q9NZQ8 1165 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
OPTN-212ENST00000487935 ATG2BQ96BY7 2078 aa13.01□□□□□ -0.33
OPTN-212ENST00000487935 UBE4BO95155 1302 aa13□□□□□ -0.33
OPTN-212ENST00000487935 CLIC2O15247 247 aa13□□□□□ -0.33
OPTN-212ENST00000487935 TGFB1I1O43294 461 aa13□□□□□ -0.33
OPTN-212ENST00000487935 TACC1O75410 805 aa13□□□□□ -0.33
OPTN-212ENST00000487935 RHOBTB3O94955 611 aa13□□□□□ -0.33
OPTN-212ENST00000487935 NFATC1O95644 943 aa13□□□□□ -0.33
OPTN-212ENST00000487935 CST3P01034 146 aaPredicted RBP13□□□□□ -0.33
OPTN-212ENST00000487935 FAM163BP0C2L3 166 aa13□□□□□ -0.33
OPTN-212ENST00000487935 GNL1P36915 607 aaPredicted RBP13□□□□□ -0.33
OPTN-212ENST00000487935 PPP3CCP48454 512 aa13□□□□□ -0.33
OPTN-212ENST00000487935 LIMK1P53667 647 aa13□□□□□ -0.33
OPTN-212ENST00000487935 SNRPFP62306 86 aaKnown RBP13□□□□□ -0.33
OPTN-212ENST00000487935 EHHADHQ08426 723 aa13□□□□□ -0.33
OPTN-212ENST00000487935 DMC1Q14565 340 aa13□□□□□ -0.33
OPTN-212ENST00000487935 SF3A2Q15428 464 aaKnown RBP13□□□□□ -0.33
OPTN-212ENST00000487935 NFKBIBQ15653 356 aa13□□□□□ -0.33
OPTN-212ENST00000487935 CCDC6Q16204 474 aa13□□□□□ -0.33
OPTN-212ENST00000487935 MDH1BQ5I0G3 518 aa13□□□□□ -0.33
OPTN-212ENST00000487935 HS2ST1Q7LGA3 356 aa13□□□□□ -0.33
OPTN-212ENST00000487935 OR6B3Q8NGW1 331 aa13□□□□□ -0.33
OPTN-212ENST00000487935 ZC3H10Q96K80 434 aaKnown RBP13□□□□□ -0.33
OPTN-212ENST00000487935 GSDMAQ96QA5 445 aa13□□□□□ -0.33
OPTN-212ENST00000487935 CGRRF1Q99675 332 aa13□□□□□ -0.33
OPTN-212ENST00000487935 TTLL2Q9BWV7 592 aa13□□□□□ -0.33
OPTN-212ENST00000487935 LINC00597Q9H2U6 94 aa13□□□□□ -0.33
OPTN-212ENST00000487935 AGPAT3Q9NRZ7 376 aa13□□□□□ -0.33
OPTN-212ENST00000487935 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
OPTN-212ENST00000487935 PCDHGA5Q9Y5G8 931 aa13□□□□□ -0.33
OPTN-212ENST00000487935 EML5Q05BV3 1969 aa13□□□□□ -0.33
OPTN-212ENST00000487935 PTPRDP23468 1912 aa13□□□□□ -0.33
OPTN-212ENST00000487935 F8VP50 259 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 LEFTY2O00292 366 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 BIN1O00499 593 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 APBB3O95704 486 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 CYP2J2P51589 502 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 USP46P62068 366 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 TNNC1P63316 161 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 NOP14P78316 857 aaKnown RBP12.99□□□□□ -0.33
OPTN-212ENST00000487935 CYP24A1Q07973 514 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 PSMD6Q15008 389 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 ISM2Q6H9L7 571 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 CAVIN1Q6NZI2 390 aaKnown RBP12.99□□□□□ -0.33
OPTN-212ENST00000487935 NELFCDQ8IXH7 590 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 XXYLT1Q8NBI6 393 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 KIAA0895Q8NCT3 520 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
OPTN-212ENST00000487935 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
OPTN-212ENST00000487935 CCDC127Q96BQ5 260 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 C8orf48Q96LL4 319 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 MRPL45Q9BRJ2 306 aaKnown RBP12.99□□□□□ -0.33
OPTN-212ENST00000487935 EBF1Q9UH73 591 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 MYO16Q9Y6X6 1858 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
OPTN-212ENST00000487935 ZNF840PA6NDX5 716 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 RHOBTB1O94844 696 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 ABL1P00519 1130 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 PTPN1P18031 435 aaKnown RBP12.98□□□□□ -0.33
OPTN-212ENST00000487935 MPLP40238 635 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 DGKEP52429 567 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 SLC7A9P82251 487 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 ZXDBP98169 803 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 STK4Q13043 487 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 TRPC3Q13507 836 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 ELF2Q15723 593 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 KLHL40Q2TBA0 621 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 WDR72Q3MJ13 1102 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 PLK5Q496M5 336 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 TDRD10Q5VZ19 366 aaKnown RBP12.98□□□□□ -0.33
OPTN-212ENST00000487935 SMYD4Q8IYR2 804 aaPredicted RBP12.98□□□□□ -0.33
OPTN-212ENST00000487935 KIAA1958Q8N8K9 716 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 SPATA20Q8TB22 786 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 SCFD1Q8WVM8 642 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 ELOVL4Q9GZR5 314 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 DUSP15Q9H1R2 295 aaPredicted RBP12.98□□□□□ -0.33
OPTN-212ENST00000487935 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
OPTN-212ENST00000487935 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
OPTN-212ENST00000487935 SPAG17Q6Q759 2223 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 A8MXQ7 604 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
OPTN-212ENST00000487935 KIF20AO95235 890 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
OPTN-212ENST00000487935 ATICP31939 592 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 OPRD1P41143 372 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 SKOR2Q2VWA4 1001 aaPredicted RBP12.97□□□□□ -0.33
OPTN-212ENST00000487935 ZNF658Q5TYW1 1059 aaPredicted RBP12.97□□□□□ -0.33
OPTN-212ENST00000487935 FILIP1Q7Z7B0 1213 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 C12orf56Q8IXR9 622 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 TSTD1Q8NFU3 115 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms