RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PARPBPQ9NWS1 579 aa5.81□□□□□ -1.48
PRPF38A-203ENST00000487160 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.81□□□□□ -1.48
PRPF38A-203ENST00000487160 DTNAQ9Y4J8 743 aa5.81□□□□□ -1.48
PRPF38A-203ENST00000487160 DNMBPQ6XZF7 1577 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 FER1L4A9Z1Z3 1794 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 TRGV11A0A075B6L2 103 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 UNC119BA6NIH7 251 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 IPO5O00410 1097 aaKnown RBP5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 PPM1DO15297 605 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 CCNT2O60583 730 aaKnown RBP5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 USP1O94782 785 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 DHRS4L1P0CG22 281 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 SRGAP2BP0DMP2 458 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 NTSR1P30989 418 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 PRKAR1BP31321 381 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 UQCRC1P31930 480 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 BMPR1AP36894 532 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 CCT5P48643 541 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 PDE6CP51160 858 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 HNRNPMP52272 730 aaKnown RBP eCLIP5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 NSUN2Q08J23 767 aaKnown RBP eCLIP5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 CCNIQ14094 377 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 TIGD6Q17RP2 521 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 CERCAMQ5T4B2 595 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 LIN54Q6MZP7 749 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 SUGP1Q8IWZ8 645 aaKnown RBP5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 ABRAQ8N0Z2 381 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 SLC30A5Q8TAD4 765 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 CXorf38Q8TB03 319 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 KATNAL1Q9BW62 490 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 TPSD1Q9BZJ3 242 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 ZNF703Q9H7S9 590 aaPredicted RBP5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 ITM2CQ9NQX7 267 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 SMPD4Q9NXE4 827 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 TMOD4Q9NZQ9 345 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 DKK2Q9UBU2 259 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 TESMINQ9Y4I5 508 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 SNX14Q9Y5W7 946 aa5.8□□□□□ -1.48
PRPF38A-203ENST00000487160 KIF13AQ9H1H9 1805 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 AQRO60306 1485 aaKnown RBP eCLIP5.79□□□□□ -1.486e-7■■■■□ 19.4
PRPF38A-203ENST00000487160 BTBD11A6QL63 1104 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ADM5C9JUS6 153 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 AGPSO00116 658 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 SPDEFO95238 335 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 LMNAP02545 664 aaKnown RBP5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ERBB2P04626 1255 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 PDHA1P08559 390 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ARP10275 920 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 GYS1P13807 737 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 HSD3B1P14060 373 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 PPP3CBP16298 524 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 NPPBP16860 134 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 LAG3P18627 525 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 PGDP52209 483 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 BCAT1P54687 386 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 PPFIA1Q13136 1202 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 TAF5Q15542 800 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 LY6KQ17RY6 165 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 SULT6B1Q6IMI4 303 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ARMC6Q6NXE6 501 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 GATAD2AQ86YP4 633 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 GALNT15Q8N3T1 639 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 OR1N1Q8NGS0 311 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 STT3BQ8TCJ2 826 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 OSCP1Q8WVF1 389 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ATG4AQ8WYN0 398 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 EID2BQ96D98 161 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 MYEOVQ96EZ4 313 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ZNF668Q96K58 619 aaPredicted RBP5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 HIST1H2AAQ96QV6 131 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 ACTRT3Q9BYD9 372 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 EPS8L2Q9H6S3 715 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 DNAJB11Q9UBS4 358 aa5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 CNOT11Q9UKZ1 510 aaKnown RBP5.79□□□□□ -1.48
PRPF38A-203ENST00000487160 TMEM200CA6NKL6 621 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 M0R3H8 397 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 SYNJ1O43426 1573 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 LPXNO60711 386 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 GLP2RO95838 553 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 SLC5A2P31639 672 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 GATMP50440 423 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 GPS1Q13098 491 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 TP53BP2Q13625 1128 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 FHL3Q13643 280 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 SPDYAQ5MJ70 313 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 ABLIM2Q6H8Q1 611 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 TANGO2Q6ICL3 276 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 GPR149Q86SP6 731 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 RASGRP3Q8IV61 690 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 SLC25A43Q8WUT9 341 aaPredicted RBP5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 ATRIPQ8WXE1 791 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 FUBP1Q96AE4 644 aaKnown RBP5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 GCC1Q96CN9 775 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 GRAMD1AQ96CP6 724 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 PTCD3Q96EY7 689 aaKnown RBP5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 ZDHHC12Q96GR4 267 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 C17orf80Q9BSJ5 609 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 MLXIPQ9HAP2 919 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 SAGE1Q9NXZ1 904 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 VPS51Q9UID3 782 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms