RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TMEM270Q6UE05 265 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 VITQ6UXI7 678 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 C11orf57Q6ZUT1 292 aaPredicted RBP13.17□□□□□ -0.3
HMG20B-211ENST00000486028 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 ARHGEF19Q8IW93 802 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 MFSD6LQ8IWD5 586 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
HMG20B-211ENST00000486028 UBR7Q8N806 425 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 PDZD8Q8NEN9 1154 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 ZMIZ2Q8NF64 920 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 FBXO32Q969P5 355 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 FBXO44Q9H4M3 255 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 TRPC7Q9HCX4 862 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 PNPLA8Q9NP80 782 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 IL37Q9NZH6 218 aa13.17□□□□□ -0.3
HMG20B-211ENST00000486028 PTPRDP23468 1912 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 ZNF263O14978 683 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 TADA3O75528 432 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 ABL1P00519 1130 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 HDCP19113 662 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 SLC9A1P19634 815 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 PON1P27169 355 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 SLC5A3P53794 718 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 IFRD2Q12894 506 aaPredicted RBP13.16□□□□□ -0.3
HMG20B-211ENST00000486028 GRM2Q14416 872 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 SIX5Q8N196 739 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 ANKRD52Q8NB46 1076 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 KAT5Q92993 513 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 UBXN6Q9BZV1 441 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 MFSD1Q9H3U5 465 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 BRD9Q9H8M2 597 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 TDP1Q9NUW8 608 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 FANCLQ9NW38 375 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
HMG20B-211ENST00000486028 HESX1Q9UBX0 185 aa13.16□□□□□ -0.3
HMG20B-211ENST00000486028 NCANO14594 1321 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 PRAMEF12O95522 483 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 CKMP06732 381 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 KRT5P13647 590 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 GDI1P31150 447 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 GOLGA7BQ2TAP0 167 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 MIIPQ5JXC2 388 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 SUGP1Q8IWZ8 645 aaKnown RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 FBXL6Q8N531 539 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 ARL14EPQ8N8R7 260 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 IRF7Q92985 503 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 USP13Q92995 863 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 RSPRY1Q96DX4 576 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 SHDQ96IW2 340 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 KREMEN1Q96MU8 473 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 CYP2S1Q96SQ9 504 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 ZMYND15Q9H091 742 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 SMG9Q9H0W8 520 aaKnown RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 KIF9Q9HAQ2 790 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 APEX2Q9UBZ4 518 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 CHORDC1Q9UHD1 332 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-211ENST00000486028 CA14Q9ULX7 337 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 CNTN6Q9UQ52 1028 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 SCML2Q9UQR0 700 aa13.15□□□□□ -0.3
HMG20B-211ENST00000486028 ZDBF2Q9HCK1 2354 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 C2orf78A6NCI8 922 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 HHLA1C9JL84 531 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 RNF225M0QZC1 329 aaPredicted RBP13.14□□□□□ -0.31
HMG20B-211ENST00000486028 CHADO15335 359 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
HMG20B-211ENST00000486028 RFX1P22670 979 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 BCAT1P54687 386 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 FCHO2Q0JRZ9 810 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 KRT31Q15323 416 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 STILQ15468 1287 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 CNGA2Q16280 664 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 LCLAT1Q6UWP7 414 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 LRRC3BQ96PB8 259 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 TRPV5Q9NQA5 729 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 ARHGEF3Q9NR81 526 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 TLR8Q9NR97 1041 aaKnown RBP13.14□□□□□ -0.31
HMG20B-211ENST00000486028 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 GMIPQ9P107 970 aa13.14□□□□□ -0.31
HMG20B-211ENST00000486028 TSPAN16Q9UKR8 245 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms