RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ZNF527Q8NB42 609 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CCDC12Q8WUD4 166 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 NRG4Q8WWG1 115 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 HEXIM2Q96MH2 286 aaKnown RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 TBC1D32Q96NH3 1257 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 DEFB118Q96PH6 123 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 TUBGCP5Q96RT8 1024 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 IWS1Q96ST2 819 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 BTBD1Q9H0C5 482 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CPVLQ9H3G5 476 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 KIAA1586Q9HCI6 787 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 SLC6A20Q9NP91 592 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 RIC8BQ9NVN3 520 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 PADI4Q9UM07 663 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CNPY2Q9Y2B0 182 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CEP83Q9Y592 693 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 NUB1Q9Y5A7 615 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 ATRXP46100 2492 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 ESYT2A0FGR8 921 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 POM121BA6NF01 834 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PRAMEF25A6NGN4 478 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 WASH4PA8MWX3 477 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 SEPT4O43236 478 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 BUB1BO60566 1050 aaPredicted RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PPP1R11O60927 126 aaPredicted RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 STAM2O75886 525 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PLEKHA8P1O95397 391 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 SNAI1O95863 264 aaPredicted RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PGK2P07205 417 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 CYBAP13498 195 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 SCG2P13521 617 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 RXRAP19793 462 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 EDNRBP24530 442 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 RPL10P27635 214 aaKnown RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 MCM2P49736 904 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 SNAP25P60880 206 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 AKAP17AQ02040 695 aaKnown RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 SNX17Q15036 470 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 CCL14Q16627 93 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PFKFB3Q16875 520 aaPredicted RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 C3orf36Q3SXR2 165 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 ZBTB41Q5SVQ8 909 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 BTBD8Q5XKL5 378 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 MCTP2Q6DN12 878 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 ZPBP2Q6X784 338 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 C22orf34Q6ZV56 151 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 ARMCX2Q7L311 632 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 FAM214BQ7L5A3 538 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 RBM12BQ8IXT5 1001 aaKnown RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 UHMK1Q8TAS1 419 aaKnown RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 TSPEARQ8WU66 669 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 CUL5Q93034 780 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 APIPQ96GX9 242 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 ZSCAN31Q96LW9 406 aaPredicted RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PPM1MQ96MI6 270 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 NT5C1BQ96P26 610 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 WNT8AQ9H1J5 351 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 KCNF1Q9H3M0 494 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PRDM12Q9H4Q4 367 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 PSTPIP2Q9H939 334 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 SH3GLB2Q9NR46 395 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 BARHL2Q9NY43 387 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 FLRT1Q9NZU1 646 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 POLG2Q9UHN1 485 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 NAP1L2Q9ULW6 460 aaPredicted RBP6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 ZNF281Q9Y2X9 895 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 Q9Y3F1 56 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 X6R8D5 127 aa6.16□□□□□ -1.42
NHLRC3-205ENST00000485407 LCTP09848 1927 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 UBA6A0AVT1 1052 aaPredicted RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 RRN3P2A6NIE6 340 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 NCAM2O15394 837 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 PRPF6O94906 941 aaKnown RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 DEXIO95424 95 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 CSTBP04080 98 aaKnown RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 AKR1A1P14550 325 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 PTPN1P18031 435 aaKnown RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 RPL17P18621 184 aaKnown RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 CALML3P27482 149 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 GNA11P29992 359 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 SDHAP31040 664 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 GJA4P35212 333 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 MAP2K6P52564 334 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 POU5F1Q01860 360 aaKnown RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 CNTN2Q02246 1040 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 ACVR2BQ13705 512 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 SPIDRQ14159 915 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 TAF12Q16514 161 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 HLA-DQA1Q5Y7H0 255 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 GALNT17Q6IS24 598 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 HIBCHQ6NVY1 386 aaPredicted RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 CFAP161Q6P656 301 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 KCNV1Q6PIU1 500 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 Q8N1Y9 231 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 CCDC148Q8NFR7 591 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 ZSCAN18Q8TBC5 510 aaPredicted RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 BICD2Q8TD16 824 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 WASF1Q92558 559 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 KAT5Q92993 513 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms