RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TSPY1Q01534 308 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PAK1Q13153 545 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 BIRC3Q13489 604 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 MAPRE1Q15691 268 aaKnown RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 NFE2Q16621 373 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PLK5Q496M5 336 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PLA2G2CQ5R387 149 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 NAIF1Q69YI7 327 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 TXNDC8Q6A555 127 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 ANKRD40Q6AI12 368 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 FILIP1Q7Z7B0 1213 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PDCL2Q8N4E4 241 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 STKLD1Q8NE28 680 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 SPPL2BQ8TCT7 592 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 USP13Q92995 863 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 CHFRQ96EP1 664 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 P2RY13Q9BPV8 354 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 LSM14BQ9BX40 385 aaKnown RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 IMPG2Q9BZV3 1241 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 NUP62CLQ9H1M0 184 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 ABCB6Q9NP58 842 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 TDP1Q9NUW8 608 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 DACH1Q9UI36 760 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 INVSQ9Y283 1065 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PCDHGA5Q9Y5G8 931 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 SNX9Q9Y5X1 595 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 WDR87Q6ZQQ6 2873 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 FRYLO94915 3013 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 SCN1AP35498 2009 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 C4orf47A7E2U8 309 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 PMM2O15305 246 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 RHOBTB1O94844 696 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 CST3P01034 146 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 DRD1P21728 446 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 BMP6P22004 513 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 WARSP23381 471 aaKnown RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 NOVA1P51513 510 aaKnown RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 NLRP12P59046 1061 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 TNNC1P63316 161 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 SHC2P98077 582 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 FOXC1Q12948 553 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 NCOA4Q13772 614 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 ELF2Q15723 593 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 SOWAHAQ2M3V2 549 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 SDHAF4Q5VUM1 108 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 WSCD1Q658N2 575 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 LMBRD2Q68DH5 695 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 KRT39Q6A163 491 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 SV2AQ7L0J3 742 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 ADGRF2Q8IZF7 708 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 TTC39CQ8N584 583 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 CCDC150Q8NCX0 1101 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 RPLP0P6Q8NHW5 317 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 PLEKHO2Q8TD55 490 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 MRPS31Q92665 395 aaKnown RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 ERCC4Q92889 916 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 ZC3H10Q96K80 434 aaKnown RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 CEP295NLQ96MC4 621 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 PI4K2AQ9BTU6 479 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 EDEM2Q9BV94 578 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 DNAI2Q9GZS0 605 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 XYLT2Q9H1B5 865 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 DUSP15Q9H1R2 295 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 TMEM8AQ9HCN3 771 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 TRPC7Q9HCX4 862 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 ARMCX3Q9UH62 379 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-213ENST00000484112 L1RE1Q9UN81 338 aa10.65□□□□□ -0.7
CPSF4-213ENST00000484112 TSC2P49815 1807 aa10.65□□□□□ -0.71
CPSF4-213ENST00000484112 KMT2BQ9UMN6 2715 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 MAP1BP46821 2468 aaKnown RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 KIF26AQ9ULI4 1882 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 C1QTNF9BB2RNN3 333 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 GIPC1O14908 333 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 CAVIN2O95810 425 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 F11P03951 625 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 PROS1P07225 676 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 C1QTNF9P0C862 333 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 HMGA1P17096 107 aaKnown RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 TRIM21P19474 475 aaKnown RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 PTMSP20962 102 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 DDX6P26196 483 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 GJA4P35212 333 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 DGKEP52429 567 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 MARSP56192 900 aaKnown RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 DLG4P78352 724 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 DMC1Q14565 340 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 CAMK4Q16566 473 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 ZNF699Q32M78 642 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 WDR72Q3MJ13 1102 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 ZNF667Q5HYK9 610 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 C1orf220Q5T0J3 134 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 TTI2Q6NXR4 508 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 TMEM150AQ86TG1 271 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms