RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 TJP3O95049 919 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 FAM163BP0C2L3 166 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 EBLN1P0CF75 366 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 TPH1P17752 444 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 DRD4P21917 467 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 PRKAR1BP31321 381 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 PRIM2P49643 509 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 LY6KQ17RY6 165 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 AARS2Q5JTZ9 985 aaKnown RBP7.18□□□□□ -1.26
USP40-213ENST00000483216 TSTD2Q5T7W7 516 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 FBXO42Q6P3S6 717 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 RNF44Q7L0R7 432 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 PARS2Q7L3T8 475 aaKnown RBP7.18□□□□□ -1.26
USP40-213ENST00000483216 ADGRG3Q86Y34 549 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 BOLLQ8N9W6 283 aaKnown RBP7.18□□□□□ -1.26
USP40-213ENST00000483216 ATP11CQ8NB49 1132 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 SARAFQ96BY9 339 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 IQCDQ96DY2 449 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 C17orf80Q9BSJ5 609 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 COLEC11Q9BWP8 271 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 R3HDMLQ9H3Y0 253 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 ASB6Q9NWX5 421 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 ARPP21Q9UBL0 812 aaPredicted RBP7.18□□□□□ -1.26
USP40-213ENST00000483216 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 COX11Q9Y6N1 276 aa7.18□□□□□ -1.26
USP40-213ENST00000483216 H0YIZ8 118 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 THAP12O43422 761 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 PROP1O75360 226 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 PIAS2O75928 621 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 C1QL1O75973 258 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 IGLV2-14P01704 120 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 A1BGP04217 495 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 NBPF7P0C2Y1 421 aaPredicted RBP7.17□□□□□ -1.26
USP40-213ENST00000483216 TSHRP16473 764 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 CYP2C18P33260 490 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 PDE1AP54750 535 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 SLC9A4Q6AI14 798 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 PLAG1Q6DJT9 500 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 CAND1Q86VP6 1230 aaKnown RBP7.17□□□□□ -1.26
USP40-213ENST00000483216 ARHGEF25Q86VW2 580 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 RASAL3Q86YV0 1011 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 DNAJC10Q8IXB1 793 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 RNF152Q8N8N0 203 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 XAGE5Q8WWM1 108 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 NELL1Q92832 810 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 BBC3Q96PG8 261 aaPredicted RBP7.17□□□□□ -1.26
USP40-213ENST00000483216 TBCBQ99426 244 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 CPNE5Q9HCH3 593 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 DUSP22Q9NRW4 184 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 FER1L4A9Z1Z3 1794 aa7.17□□□□□ -1.26
USP40-213ENST00000483216 POM121BA6NF01 834 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 PRKCBP05771 671 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
USP40-213ENST00000483216 GPD1P21695 349 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 EPHA3P29320 983 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 UQCRC1P31930 480 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 TM4SF4P48230 202 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 TPTEP56180 551 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 NANOS3P60323 173 aaKnown RBP7.16□□□□□ -1.26
USP40-213ENST00000483216 TIAL1Q01085 375 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP40-213ENST00000483216 MTHFD1LQ6UB35 978 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 RD3Q7Z3Z2 195 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 DPP9Q86TI2 863 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 LRRC71Q8N4P6 559 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 TBC1D5Q92609 795 aa7.16□□□□□ -1.26
USP40-213ENST00000483216 CLCA1A8K7I4 914 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 QSOX1O00391 747 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 AREL1O15033 823 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 STT3AP46977 705 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 ITGA8P53708 1063 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 EEFSECP57772 596 aaKnown RBP7.15□□□□□ -1.26
USP40-213ENST00000483216 TBC1D25Q3MII6 688 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 MZT2AQ6P582 158 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 Q6ZWC4 215 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 ZNF804AQ7Z570 1209 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 RAB11FIP4Q86YS3 637 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 VGLL2Q8N8G2 317 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 ZNF668Q96K58 619 aaPredicted RBP7.15□□□□□ -1.26
USP40-213ENST00000483216 FSD1LQ9BXM9 530 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 STARD7Q9NQZ5 370 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 ADAM21Q9UKJ8 722 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 PADI4Q9UM07 663 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 USP22Q9UPT9 525 aa7.15□□□□□ -1.26
USP40-213ENST00000483216 DRG1Q9Y295 367 aaKnown RBP7.15□□□□□ -1.26
USP40-213ENST00000483216 MYO15BQ96JP2 1530 aa7.15□□□□□ -1.27
USP40-213ENST00000483216 VNN1O95497 513 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 PICALMQ13492 652 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 KRT28Q7Z3Y7 464 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 LIX1LQ8IVB5 337 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 CRAMP1Q96RY5 1269 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 DPCDQ9BVM2 203 aaPredicted RBP7.14□□□□□ -1.27
USP40-213ENST00000483216 VN1R3Q9BXE9 311 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 INO80BQ9C086 356 aaPredicted RBP7.14□□□□□ -1.27
USP40-213ENST00000483216 TBC1D23Q9NUY8 699 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 MYO1AQ9UBC5 1043 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 CCNL1Q9UK58 526 aaPredicted RBP7.14□□□□□ -1.27
USP40-213ENST00000483216 WNT6Q9Y6F9 365 aa7.14□□□□□ -1.27
USP40-213ENST00000483216 SPATA31A6Q5VVP1 1343 aa7.13□□□□□ -1.27
USP40-213ENST00000483216 A0A1W2PPC4 97 aa7.13□□□□□ -1.27
USP40-213ENST00000483216 PSMD9O00233 223 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms