RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FOXG1P55316 489 aaPredicted RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 LAMB3Q13751 1172 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZNF268Q14587 947 aaPredicted RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 MLC1Q15049 377 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 FAM187BQ17R55 369 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 PLA1AQ53H76 456 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 AWAT1Q58HT5 328 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 LMBRD2Q68DH5 695 aaPredicted RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 SHC4Q6S5L8 630 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 BCDIN3DQ7Z5W3 292 aaKnown RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 GAS2L3Q86XJ1 694 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 KRT73Q86Y46 540 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 MPP5Q8N3R9 675 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 NRACQ8N912 160 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 PPP1R35Q8TAP8 253 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 TMEM79Q9BSE2 394 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 GABBR1Q9UBS5 961 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 AMFRQ9UKV5 643 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 BTN3A1O00481 513 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 CES2O00748 559 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 SOCS2O14508 198 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 DSCR3O14972 297 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 GCATO75600 419 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 UBXN7O94888 489 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 FGAP02671 866 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 MYCLP12524 364 aaPredicted RBP3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 HOXB6P17509 224 aaKnown RBP3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 POLGP54098 1239 aaPredicted RBP3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 MEX3CQ5U5Q3 659 aaKnown RBP3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZNF517Q6ZMY9 492 aaPredicted RBP3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZNF813Q6ZN06 617 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 IRF2BP2Q7Z5L9 587 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 DAAM2Q86T65 1068 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 DENND1CQ8IV53 801 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 SIRT6Q8N6T7 355 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 ADAMTS18Q8TE60 1221 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 LRGUKQ96M69 825 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 RHOBTB2Q9BYZ6 727 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZMAT3Q9HA38 289 aaKnown RBP3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 TFCP2L1Q9NZI6 479 aa3.86□□□□□ -1.79
LAPTM4A-202ENST00000483117 A0A1W2PPL8 197 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 TMEM232C9JQI7 657 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 PMPCBO75439 489 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 FGBP02675 491 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 MYBP10242 640 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 HOXD9P28356 352 aaPredicted RBP3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 GKP32189 559 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 SLC13A2Q13183 592 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 RBMS2Q15434 407 aaKnown RBP3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 PTPROQ16827 1216 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZDHHC24Q6UX98 284 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 SFTPA1Q8IWL2 248 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 ANKRD13AQ8IZ07 590 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 OR6B3Q8NGW1 331 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 C16orf52Q8NHV5 167 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZCRB1Q8TBF4 217 aaKnown RBP3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 DNAJB14Q8TBM8 379 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 KBTBD7Q8WVZ9 684 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 COQ8BQ96D53 544 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 RSPRY1Q96DX4 576 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 GPATCH3Q96I76 525 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 CCDC17Q96LX7 622 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 FYTTD1Q96QD9 318 aaKnown RBP3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 ACO2Q99798 780 aaKnown RBP3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 SMURF2Q9HAU4 748 aa3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 DRG1Q9Y295 367 aaKnown RBP3.85□□□□□ -1.79
LAPTM4A-202ENST00000483117 H3BML4 177 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 PSMD9O00233 223 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 TBC1D4O60343 1298 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 A1BGP04217 495 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 COPB1P53618 953 aaKnown RBP3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 LINC00205P59089 165 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 SUMO2P61956 95 aaKnown RBP3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 GHRHRQ02643 423 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 LMAN2Q12907 356 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 TRIM71Q2Q1W2 868 aaKnown RBP3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 CERCAMQ5T4B2 595 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 DCAF12L1Q5VU92 463 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 MRPL10Q7Z7H8 261 aaKnown RBP3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 TPH2Q8IWU9 490 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 SPARTQ8N0X7 666 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 OSR1Q8TAX0 266 aaPredicted RBP3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 PIGOQ8TEQ8 1089 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 WASF1Q92558 559 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 MAML1Q92585 1016 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 CHMP4AQ9BY43 222 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 DPH1Q9BZG8 443 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZSCAN32Q9NX65 697 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 MTMR4Q9NYA4 1195 aa3.84□□□□□ -1.79
LAPTM4A-202ENST00000483117 BTBD19C9JJ37 291 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 INSIG1O15503 277 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 ALDH1L1O75891 902 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 MT-CO3P00414 261 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 SNHG28P0DPA3 235 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 APEHP13798 732 aaKnown RBP3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 PRF1P14222 555 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 HSPA6P17066 643 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 BCAT1P54687 386 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms