RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 IFRD2Q12894 506 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-214ENST00000482733 GOLGA7BQ2TAP0 167 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 ZSCAN23Q3MJ62 389 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 TXNDC8Q6A555 127 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 LCLAT1Q6UWP7 414 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 MFSD6LQ8IWD5 586 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 ST13P5Q8NFI4 369 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-214ENST00000482733 SCAMP5Q8TAC9 235 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 KIF9Q9HAQ2 790 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 SIX2Q9NPC8 291 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 DOCK6Q96HP0 2047 aa17.53■□□□□ 0.4
HMGN1-214ENST00000482733 DOCK8Q8NF50 2099 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 HHLA1C9JL84 531 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 RNF225M0QZC1 329 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 O00370 1275 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 NARSO43776 548 aaKnown RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 USP17L7P0C7H9 530 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 SETSIPP0DME0 302 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 PSMC3P17980 439 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 VIPR2P41587 438 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 BST2Q10589 180 aaKnown RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 KCNMA1Q12791 1236 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 ZNF268Q14587 947 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 CNGA2Q16280 664 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 TMEM31Q5JXX7 168 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 SNX30Q5VWJ9 437 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 GJB7Q6PEY0 223 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 DHX40Q8IX18 779 aaKnown RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 CELF5Q8N6W0 485 aaKnown RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 SHC3Q92529 594 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 TRMT61BQ9BVS5 477 aaKnown RBP17.52■□□□□ 0.4
HMGN1-214ENST00000482733 PLA2G2FQ9BZM2 168 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 TRPC7Q9HCX4 862 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 PLCB1Q9NQ66 1216 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 WNT16Q9UBV4 365 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 DNAJC12Q9UKB3 198 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 DAAM1Q9Y4D1 1078 aa17.52■□□□□ 0.4
HMGN1-214ENST00000482733 PTPRDP23468 1912 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 TMEM221A6NGB7 291 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 LGALS16A8MUM7 142 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 M0R296 226 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 XPO1O14980 1071 aaKnown RBP17.51■□□□□ 0.39
HMGN1-214ENST00000482733 MED7O43513 233 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 CKMP06732 381 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 HDCP19113 662 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 KIF11P52732 1056 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 TPM4P67936 248 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 GPC5P78333 572 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 NFKBIBQ15653 356 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 KLHDC7AQ5VTJ3 777 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 VITQ6UXI7 678 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 TTC30AQ86WT1 665 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 YAF2Q8IY57 180 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 TFAP2BQ92481 460 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 LSM14BQ9BX40 385 aaKnown RBP17.51■□□□□ 0.39
HMGN1-214ENST00000482733 HSD3B7Q9H2F3 369 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 SMOC2Q9H3U7 446 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 TDP1Q9NUW8 608 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 FBXL21Q9UKT6 434 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGN1-214ENST00000482733 SCML2Q9UQR0 700 aa17.51■□□□□ 0.39
HMGN1-214ENST00000482733 PRR33A8MZF0 331 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 ABL1P00519 1130 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 ZDHHC11BP0C7U3 371 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 TUBP50607 506 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 APBA1Q02410 837 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 PDE4CQ08493 712 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 FCHO2Q0JRZ9 810 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 IQCB1Q15051 598 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 MEA1Q16626 185 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 DPY19L2P1Q6NXN4 242 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 BMP8AQ7Z5Y6 402 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 PIGZQ86VD9 579 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 BPIFB1Q8TDL5 484 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 IRF7Q92985 503 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 ASIC4Q96FT7 647 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 BRD9Q9H8M2 597 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 TLR8Q9NR97 1041 aaKnown RBP17.5■□□□□ 0.39
HMGN1-214ENST00000482733 THG1LQ9NWX6 298 aaKnown RBP17.5■□□□□ 0.39
HMGN1-214ENST00000482733 CHORDC1Q9UHD1 332 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-214ENST00000482733 USP3Q9Y6I4 520 aa17.5■□□□□ 0.39
HMGN1-214ENST00000482733 C2orf78A6NCI8 922 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 ZNF263O14978 683 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 PRAMEF12O95522 483 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 CFHP08603 1231 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 UCHL3P15374 230 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
HMGN1-214ENST00000482733 GNA15P30679 374 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 USP8P40818 1118 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 PLA2G4AP47712 749 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 PSEN1P49768 467 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 BPIFB4P59827 614 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 PLCB2Q00722 1185 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 UBXN1Q04323 297 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 GRM2Q14416 872 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 PKDCCQ504Y2 493 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 RAB41Q5JT25 222 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 HECTD3Q5T447 861 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms