RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OVCA2Q8WZ82 227 aa22.1■■□□□ 1.13
SEC13-217ENST00000482647 TSPAN16Q9UKR8 245 aa22.1■■□□□ 1.13
SEC13-217ENST00000482647 DUSP12Q9UNI6 340 aa22.1■■□□□ 1.13
SEC13-217ENST00000482647 ZNF840PA6NDX5 716 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 HHLA1C9JL84 531 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 O00370 1275 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 SRFP11831 508 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 USP8P40818 1118 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 PDE6CP51160 858 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 IQCB1Q15051 598 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 CNGA2Q16280 664 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 TFAP2BQ92481 460 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 SHC3Q92529 594 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 FBXO32Q969P5 355 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 LSM14BQ9BX40 385 aaKnown RBP22.09■■□□□ 1.13
SEC13-217ENST00000482647 C1QTNF1Q9BXJ1 281 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 SMOC2Q9H3U7 446 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 TRPC7Q9HCX4 862 aa22.09■■□□□ 1.13
SEC13-217ENST00000482647 TRAV19A0A0A6YYK7 116 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 FAM92AA1XBS5 289 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 LGALS16A8MUM7 142 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 DPYSL4O14531 572 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 ABL1P00519 1130 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 ATP1A3P13637 1013 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 PFKLP17858 780 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 RFX1P22670 979 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 BCAT1P54687 386 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 TPM4P67936 248 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 UBXN1Q04323 297 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 SIGLEC14Q08ET2 396 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 DPY19L2P1Q6NXN4 242 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 TRIM67Q6ZTA4 783 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 TTC30AQ86WT1 665 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 GPIHBP1Q8IV16 184 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 PLA2G2FQ9BZM2 168 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 CBX8Q9HC52 389 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 PLCB1Q9NQ66 1216 aa22.08■■□□□ 1.13
SEC13-217ENST00000482647 CHORDC1Q9UHD1 332 aaPredicted RBP22.08■■□□□ 1.13
SEC13-217ENST00000482647 NCANO14594 1321 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 HEPACAM2A8MVW5 462 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 NARSO43776 548 aaKnown RBP22.07■■□□□ 1.12
SEC13-217ENST00000482647 PSMC3P17980 439 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 HDCP19113 662 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 BRD2P25440 801 aaKnown RBP22.07■■□□□ 1.12
SEC13-217ENST00000482647 KIF11P52732 1056 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 BST2Q10589 180 aaKnown RBP22.07■■□□□ 1.12
SEC13-217ENST00000482647 APTXQ7Z2E3 356 aaKnown RBP22.07■■□□□ 1.12
SEC13-217ENST00000482647 GPRIN1Q7Z2K8 1008 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 PIGZQ86VD9 579 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 MFSD6LQ8IWD5 586 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 CELF5Q8N6W0 485 aaKnown RBP22.07■■□□□ 1.12
SEC13-217ENST00000482647 UBA3Q8TBC4 463 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 DEPDC1BQ8WUY9 529 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 TRMT61BQ9BVS5 477 aaKnown RBP22.07■■□□□ 1.12
SEC13-217ENST00000482647 SLC2A4RGQ9NR83 387 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 OBP2AQ9NY56 170 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.07■■□□□ 1.12
SEC13-217ENST00000482647 SCML2Q9UQR0 700 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 PTPRDP23468 1912 aa22.07■■□□□ 1.12
SEC13-217ENST00000482647 C2orf78A6NCI8 922 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 FOXN3O00409 490 aaPredicted RBP22.06■■□□□ 1.12
SEC13-217ENST00000482647 XPO1O14980 1071 aaKnown RBP22.06■■□□□ 1.12
SEC13-217ENST00000482647 MED7O43513 233 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 CKMP06732 381 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 USP17L7P0C7H9 530 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 SETSIPP0DME0 302 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 UCHL3P15374 230 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 GPC5P78333 572 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 PDE4CQ08493 712 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 RAPGEF1Q13905 1077 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 SNX30Q5VWJ9 437 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 VITQ6UXI7 678 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 PCMTD1Q96MG8 357 aaPredicted RBP22.06■■□□□ 1.12
SEC13-217ENST00000482647 CYP2S1Q96SQ9 504 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 ZSWIM1Q9BR11 485 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 SMG9Q9H0W8 520 aaKnown RBP22.06■■□□□ 1.12
SEC13-217ENST00000482647 TDP1Q9NUW8 608 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 AJAP1Q9UKB5 411 aaPredicted RBP22.06■■□□□ 1.12
SEC13-217ENST00000482647 MYO10Q9HD67 2058 aa22.06■■□□□ 1.12
SEC13-217ENST00000482647 PRAMEF12O95522 483 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 CALCAP01258 141 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 PFKPQ01813 784 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 GRM2Q14416 872 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 ZNF268Q14587 947 aaPredicted RBP22.05■■□□□ 1.12
SEC13-217ENST00000482647 FILIP1LQ4L180 1135 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 PKDCCQ504Y2 493 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 LUZP1Q86V48 1076 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 YAF2Q8IY57 180 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 ARL14EPQ8N8R7 260 aaPredicted RBP22.05■■□□□ 1.12
SEC13-217ENST00000482647 USP13Q92995 863 aaPredicted RBP22.05■■□□□ 1.12
SEC13-217ENST00000482647 RSPRY1Q96DX4 576 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 NAA15Q9BXJ9 866 aaKnown RBP22.05■■□□□ 1.12
SEC13-217ENST00000482647 STK33Q9BYT3 514 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 KIF9Q9HAQ2 790 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 TLR8Q9NR97 1041 aaKnown RBP22.05■■□□□ 1.12
SEC13-217ENST00000482647 FAM207AQ9NSI2 230 aaPredicted RBP22.05■■□□□ 1.12
SEC13-217ENST00000482647 GMIPQ9P107 970 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 WNT16Q9UBV4 365 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 FBXL21Q9UKT6 434 aa22.05■■□□□ 1.12
SEC13-217ENST00000482647 DAAM1Q9Y4D1 1078 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms