RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 CPB2Q96IY4 423 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 SAMD11Q96NU1 681 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 RPS6KC1Q96S38 1066 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 DIRC2Q96SL1 478 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 FIZ1Q96SL8 496 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 TSG101Q99816 390 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 EPB41L4BQ9H329 900 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 TMX1Q9H3N1 280 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 PDZD7Q9H5P4 517 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 POLD4Q9HCU8 107 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 SLC39A2Q9NP94 309 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 TYW1Q9NV66 732 aaKnown RBP7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 TBC1D7Q9P0N9 293 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 EBF1Q9UH73 591 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 MSRAQ9UJ68 235 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 PCDHB2Q9Y5E7 798 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 PCDHA5Q9Y5H7 936 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 STYXL1Q9Y6J8 313 aa7.28□□□□□ -1.24
CTNNB1-213ENST00000482042 BICDL2A1A5D9 508 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PDXKO00764 312 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PSMA7O14818 248 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 OGTO15294 1046 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 SIGLEC6O43699 453 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 CSDE1O75534 798 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PRPF6O94906 941 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 GJB5O95377 273 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 NPTXRO95502 500 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 FGFR1OPO95684 399 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 KRT1P04264 644 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 MYBP10242 640 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PROZP22891 400 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 RPL13P26373 211 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 HOXA11P31270 313 aaPredicted RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 SMAD3P84022 425 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 MCL1Q07820 350 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 NFIL3Q16649 462 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 KNOP1Q1ED39 458 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 LRIT3Q3SXY7 679 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 ZC2HC1CQ53FD0 456 aaPredicted RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 ARMCX5Q6P1M9 558 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 FOXR2Q6PJQ5 311 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 SASS6Q6UVJ0 657 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 USP37Q86T82 979 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 NT5DC4Q86YG4 428 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 SPPL2CQ8IUH8 684 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 HERC6Q8IVU3 1022 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 C12orf56Q8IXR9 622 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 TMEM192Q8IY95 271 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 CMTR2Q8IYT2 770 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 TMEM174Q8WUU8 243 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 POMGNT1Q8WZA1 660 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 TCTN2Q96GX1 697 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 DHTKD1Q96HY7 919 aaPredicted RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 ACAP3Q96P50 834 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 FAM193BQ96PV7 902 aaPredicted RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 RAD9AQ99638 391 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 KIFC3Q9BVG8 833 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 TARS2Q9BW92 718 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 TMEM117Q9H0C3 514 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PRO3102Q9H379 93 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 RSAD1Q9HA92 442 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PLEKHA5Q9HAU0 1116 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 PTPRHQ9HD43 1115 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 STK39Q9UEW8 545 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 AGO2Q9UKV8 859 aaKnown RBP7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 IPPQ9Y573 584 aa7.27□□□□□ -1.25
CTNNB1-213ENST00000482042 TSC2P49815 1807 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 B4GALT5O43286 388 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 MGEA5O60502 916 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 DGKIO75912 1065 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 IL18RAPO95256 599 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 RECKO95980 971 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 IMPDH2P12268 514 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 CASP1P29466 404 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 RAP1GAPP47736 663 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 EPHB4P54760 987 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 HTRA4P83105 476 aaPredicted RBP7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 LRRC63Q05C16 580 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 STK4Q13043 487 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 ZNF394Q53GI3 561 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 C9orf50Q5SZB4 431 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.26□□□□□ -1.252e-7■□□□□ 10
CTNNB1-213ENST00000482042 RTN4RL1Q86UN2 441 aaPredicted RBP7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 IRF2BP1Q8IU81 584 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 LRRC43Q8N309 656 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 GPD1LQ8N335 351 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 FIBCD1Q8N539 461 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 MLKLQ8NB16 471 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 GPT2Q8TD30 523 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 SCFD1Q8WVM8 642 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 SLC6A18Q96N87 628 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 YME1L1Q96TA2 773 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 MSTO1Q9BUK6 570 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 SLC6A17Q9H1V8 727 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 CDT1Q9H211 546 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 RPF1Q9H9Y2 349 aaKnown RBP7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 SLC38A7Q9NVC3 462 aa7.26□□□□□ -1.25
CTNNB1-213ENST00000482042 ANKFY1Q9P2R3 1169 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms