RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TRIM43BA6NCK2 446 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 BOLA2-SMG1P6H3BVE0 249 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 FCHO1O14526 889 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 TUBBP07437 444 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 PECAM1P16284 738 aaPredicted RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 ADMP35318 185 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 PDE6CP51160 858 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 SLC5A3P53794 718 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 CTBP1Q13363 440 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 SNAPC2Q13487 334 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 TDGQ13569 410 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 FIGNQ5HY92 759 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 KRT74Q7RTS7 529 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 TSPYL5Q86VY4 417 aaPredicted RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 LINC00346Q8IVM7 164 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 ZNF34Q8IZ26 560 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 AVL9Q8NBF6 648 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 CEP70Q8NHQ1 597 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 IFI44Q8TCB0 444 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 RSAD2Q8WXG1 361 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 CLEC4DQ8WXI8 215 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 TRIM43Q96BQ3 446 aaPredicted RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 HEXIM2Q96MH2 286 aaKnown RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 NCAPGQ9BPX3 1015 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 FAM129AQ9BZQ8 928 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 FSCN3Q9NQT6 498 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 MTRRQ9UBK8 725 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 H0Y626 953 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 PIK3R2O00459 728 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 BUB1BO60566 1050 aaPredicted RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 PCDH8O95206 1070 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 EFEMP2O95967 443 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 ANXA1P04083 346 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 AMY1AP04745 511 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 XBP1P17861 261 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 EXOSC9Q06265 439 aaKnown RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 SMAD4Q13485 552 aaKnown RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 EIF4A2Q14240 407 aaKnown RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 CHRNA2Q15822 529 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 CST9Q5W186 159 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 SHQ1Q6PI26 577 aaKnown RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 TRAT1Q6PIZ9 186 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 ZNF804AQ7Z570 1209 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 RPAINQ86UA6 219 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 CCDC170Q8IYT3 715 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 TEX9Q8N6V9 391 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 CUL5Q93034 780 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 HIC2Q96JB3 615 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 REEP2Q9BRK0 252 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 OSBPL6Q9BZF3 934 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 GRPEL1Q9HAV7 217 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 USP36Q9P275 1121 aaKnown RBP3.65□□□□□ -1.83
SMC6-208ENST00000481708 GULP1Q9UBP9 304 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 FAM95CA0A1B0GW59 222 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 BTBD11A6QL63 1104 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 C9orf172C9J069 976 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 CLASP2O75122 1294 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 TK1P04183 234 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SDHAP31040 664 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PAPOLAP51003 745 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 POU4F1Q01851 419 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 LSAMPQ13449 338 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 UVSSAQ2YD98 709 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SUSD1Q6UWL2 747 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 USP50Q70EL3 339 aaPredicted RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 PLPPR4Q7Z2D5 763 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 FAM90A1Q86YD7 464 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PLEKHO2Q8TD55 490 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PTP4A1Q93096 173 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 CRAMP1Q96RY5 1269 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 ABHD1Q96SE0 405 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 HERC2P3Q9BVR0 1158 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 LMBRD1Q9NUN5 540 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 MRPS18AQ9NVS2 196 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 BTBD7Q9P203 1132 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 ACSL6Q9UKU0 697 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 RNF225M0QZC1 329 aaPredicted RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 SLC22A3O75751 556 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 CYP17A1P05093 508 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SRFP11831 508 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 KCNA2P16389 499 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PTPN1P18031 435 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 RXRAP19793 462 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 MC1RQ01726 317 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 NFE2L1Q14494 772 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PSMD6Q15008 389 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SETMARQ53H47 684 aaPredicted RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 UBAP2Q5T6F2 1119 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 MOSPD2Q8NHP6 518 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 GPR20Q99678 358 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 CHST8Q9H2A9 424 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PDE7BQ9NP56 450 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 NECTIN3Q9NQS3 549 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 PDRG1Q9NUG6 133 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 FEZ2Q9UHY8 353 aaPredicted RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 ZHX1Q9UKY1 873 aaPredicted RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 DNAJC16Q9Y2G8 782 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 TNRC6BQ9UPQ9 1833 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 WDR81Q562E7 1941 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 STX16-NPEPL1H3BU86 382 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms