RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 PFKLP17858 780 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 VAMP7P51809 220 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 ORC1Q13415 861 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 EML3Q32P44 896 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 SPOPLQ6IQ16 392 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 ACOT1Q86TX2 421 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 NUP93Q8N1F7 819 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 EXOC4Q96A65 974 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 MMRN2Q9H8L6 949 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 SMPD4Q9NXE4 827 aa23.6■■□□□ 1.37
GPCPD1-206ENST00000481690 LEFTY2O00292 366 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 HLA-DRAP01903 254 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 TRIM49P0CI25 452 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 TRIM49CP0CI26 452 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 TCF3P15923 654 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 YWHAQP27348 245 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 GALK1P51570 392 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 SRSF5Q13243 272 aaKnown RBP23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 LONP2Q86WA8 852 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 FBXO32Q969P5 355 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 SMARCD1Q96GM5 515 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 CCDC34Q96HJ3 373 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 KCNK16Q96T55 309 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 RNF38Q9H0F5 515 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 LINC00597Q9H2U6 94 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 DMAP1Q9NPF5 467 aaPredicted RBP23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 CPQQ9Y646 472 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 RALGAPA1Q6GYQ0 2036 aa23.59■■□□□ 1.37
GPCPD1-206ENST00000481690 IKBKBO14920 756 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 RNF40O75150 1001 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 AP1G2O75843 785 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 AKAP3O75969 853 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 RTN3O95197 1032 aaPredicted RBP23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 NFATC1O95644 943 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 KRT13P13646 458 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 HOXC13P31276 330 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 NDST1P52848 882 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 ZXDBP98169 803 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 NR1H3Q13133 447 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 SIM2Q14190 667 aaPredicted RBP23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 C1orf220Q5T0J3 134 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 FAM186BQ8IYM0 893 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 GUF1Q8N442 669 aaKnown RBP23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 TAF4BQ92750 862 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 CD101Q93033 1021 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 RMDN1Q96DB5 314 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 IMPG2Q9BZV3 1241 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 FBRSL1Q9HCM7 1045 aaKnown RBP23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 KRT82Q9NSB4 513 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 HMGXB4Q9UGU5 601 aa23.58■■□□□ 1.37
GPCPD1-206ENST00000481690 MAPK13O15264 365 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 ATG13O75143 517 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 ASS1P00966 412 aaKnown RBP23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 OAS1P00973 400 aaKnown RBP23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 MBL2P11226 248 aaPredicted RBP23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 CCDC130P13994 396 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 DRD1P21728 446 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 RPL13P26373 211 aaKnown RBP23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 GCLMP48507 274 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 SLC5A3P53794 718 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 SLC7A9P82251 487 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 BECN1Q14457 450 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 NFIL3Q16649 462 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 PAQR9Q6ZVX9 377 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 INTS8Q75QN2 995 aaKnown RBP23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 PDZD8Q8NEN9 1154 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 FAM49BQ9NUQ9 324 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 USP18Q9UMW8 372 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 SLC8A2Q9UPR5 921 aa23.57■■□□□ 1.36
GPCPD1-206ENST00000481690 MYOFQ9NZM1 2061 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 SCAMP3O14828 347 aaKnown RBP23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 HRO43593 1189 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 ASPAP45381 313 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 ADAM9Q13443 819 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 LAIR1Q6GTX8 287 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 SMYD4Q8IYR2 804 aaPredicted RBP23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 FUKQ8N0W3 1084 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 SCAMP5Q8TAC9 235 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 SLC2A14Q8TDB8 520 aa23.56■■□□□ 1.36
GPCPD1-206ENST00000481690 EML5Q05BV3 1969 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 GOLGA6L4A6NEF3 574 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 OLFM2O95897 454 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 CNR2P34972 360 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 PSMC2P35998 433 aaKnown RBP23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 PXNP49023 591 aaPredicted RBP23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 PPP3CAQ08209 521 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 PNOCQ13519 176 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 FBXO43Q4G163 708 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 CEP68Q76N32 757 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 FILIP1Q7Z7B0 1213 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 WDR5BQ86VZ2 330 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 GPR161Q8N6U8 529 aaKnown RBP23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 TAS1R2Q8TE23 839 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 OVCA2Q8WZ82 227 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 CFAP97Q9P2B7 532 aa23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 CHORDC1Q9UHD1 332 aaPredicted RBP23.55■■□□□ 1.36
GPCPD1-206ENST00000481690 SPAG17Q6Q759 2223 aa23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 FRYLO94915 3013 aa23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 TRIM21P19474 475 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms