RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 MAML2Q8IZL2 1156 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 BPIFB1Q8TDL5 484 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 SMARCD1Q96GM5 515 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 TNIP3Q96KP6 325 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 HNRNPABQ99729 332 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 FAM83CQ9BQN1 747 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 LINC00597Q9H2U6 94 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 EBF3Q9H4W6 596 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 CCSER2Q9H7U1 834 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 DMAP1Q9NPF5 467 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 TDP1Q9NUW8 608 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 POLR3BQ9NW08 1133 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 OSER1Q9NX31 292 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 WNT6Q9Y6F9 365 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 CFAP54Q96N23 3096 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRAV19A0A0A6YYK7 116 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 DPYSL4O14531 572 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 MDM4O15151 490 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 CHADO15335 359 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 CYP26A1O43174 497 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 TBX18O95935 607 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 CKMP06732 381 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 HDCP19113 662 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 RFX1P22670 979 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 AVPR1AP37288 418 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 PFKPQ01813 784 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 PRKCQQ04759 706 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 USP4Q13107 963 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 GAS6Q14393 721 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 RRAGAQ7L523 313 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 TTC30AQ86WT1 665 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 YAF2Q8IY57 180 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 NUP93Q8N1F7 819 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 CELF5Q8N6W0 485 aaKnown RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 SH3RF2Q8TEC5 729 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 TFAP2BQ92481 460 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 DNASE1L2Q92874 299 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 IRF7Q92985 503 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 FBXO32Q969P5 355 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 KREMEN1Q96MU8 473 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 CRACR2AQ9BSW2 395 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 IMPG2Q9BZV3 1241 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 NMUR1Q9HB89 426 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 FBRSL1Q9HCM7 1045 aaKnown RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 CSNK1G1Q9HCP0 422 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 IL37Q9NZH6 218 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 UXTQ9UBK9 157 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 RWDD2AQ9UIY3 292 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 AJAP1Q9UKB5 411 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 NUDT5Q9UKK9 219 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 PIEZO1Q92508 2521 aa12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 KIF26AQ9ULI4 1882 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF1-207ENST00000481260 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 SPECC1L-ADORA2AF8WAN1 911 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 LEFTY2O00292 366 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 COCHO43405 550 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 STX10O60499 249 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 GABBR2O75899 941 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 OAS1P00973 400 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 FAM200BP0CF97 657 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 DDX6P26196 483 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 YWHAQP27348 245 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 MTF1Q14872 753 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 PON2Q15165 354 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 ANGPT1Q15389 498 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 TSSK4Q6SA08 328 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 Q6ZS52 159 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 CREBRFQ8IUR6 639 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 TRIML1Q8N9V2 468 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 FAM3CQ92520 227 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 TMEM176AQ96HP8 235 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 INTS2Q9H0H0 1204 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 ACP6Q9NPH0 428 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 OBP2AQ9NY56 170 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 TRPM5Q9NZQ8 1165 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 CPQQ9Y646 472 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 CACNA1IQ9P0X4 2223 aa12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 ZNF638Q14966 1978 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-207ENST00000481260 OLFM2O95897 454 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 USP17L7P0C7H9 530 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 CTHP32929 405 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 KPNA1P52294 538 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 MARSP56192 900 aaKnown RBP12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 MESP2Q0VG99 397 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ZNF268Q14587 947 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 GOLGA7BQ2TAP0 167 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms