RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 MED25Q71SY5 747 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 SYT13Q7L8C5 426 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 KRT73Q86Y46 540 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 LGI4Q8N135 537 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 TMEM57Q8N5G2 664 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 OR6Y1Q8NGX8 325 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 GRAMD1AQ96CP6 724 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 BORCS6Q96GS4 357 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 PHACTR3Q96KR7 559 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 TWSG1Q9GZX9 223 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 BRD8Q9H0E9 1235 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 TMEM168Q9H0V1 697 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 VPS16Q9H269 839 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 ELAC1Q9H777 363 aaKnown RBP4.13□□□□□ -1.75
UBE2F-221ENST00000480828 ZBTB26Q9HCK0 441 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 PREBQ9HCU5 417 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 XPNPEP3Q9NQH7 507 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 FSCN3Q9NQT6 498 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 SMYD2Q9NRG4 433 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 ZSCAN32Q9NX65 697 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 VSX1Q9NZR4 365 aaPredicted RBP4.13□□□□□ -1.75
UBE2F-221ENST00000480828 PPP4R1LQ9P1A2 415 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 KCND3Q9UK17 655 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 MRPS17Q9Y2R5 130 aaKnown RBP4.13□□□□□ -1.75
UBE2F-221ENST00000480828 NR2E1Q9Y466 385 aa4.13□□□□□ -1.75
UBE2F-221ENST00000480828 ANKRD18BA2A2Z9 1011 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 PGPEP1LA6NFU8 196 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 C9orf118A6NHY6 69 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 AQP7P3A6NL99 342 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 TBKBP1A7MCY6 615 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 E7EVH7 732 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 MATN2O00339 956 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 POLRMTO00411 1230 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RGS10O43665 173 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SRGAP2O75044 1071 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 TIPRLO75663 272 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RTN3O95197 1032 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 VIPP01282 170 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 CYP1A1P04798 512 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 CYP2C9P11712 490 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 FCER1AP12319 257 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 XRCC6P12956 609 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 YY1P25490 414 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 NTSR1P30989 418 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 VAMP2P63027 116 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 POU5F1Q01860 360 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 TCF15Q12870 199 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RIN1Q13671 783 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 TSTQ16762 297 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 ZNF750Q32MQ0 723 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 ZMAT1Q5H9K5 638 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 FAM205BPQ63HN1 556 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 ABLIM2Q6H8Q1 611 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 PDXDC1Q6P996 788 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 NEK10Q6ZWH5 1172 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RAB11FIP2Q7L804 512 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 LIMS2Q7Z4I7 341 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 CHD1LQ86WJ1 897 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 CFAP52Q8N1V2 620 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 FITM2Q8N6M3 262 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 DNAJB14Q8TBM8 379 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 BPIFB1Q8TDL5 484 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SMCR8Q8TEV9 937 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 NUP133Q8WUM0 1156 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SNRNP27Q8WVK2 155 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RABGGTAQ92696 567 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 TFAP2CQ92754 450 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 C8orf49Q96NF6 230 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SDF4Q9BRK5 362 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 LSM14BQ9BX40 385 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SLC46A2Q9BY10 475 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SIK2Q9H0K1 926 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 TMPRSS5Q9H3S3 457 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 SMOC2Q9H3U7 446 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RNPEPQ9H4A4 650 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 PRKRIP1Q9H875 184 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 AGO3Q9H9G7 860 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 BARX1Q9HBU1 254 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 HELLSQ9NRZ9 838 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 ETAA1Q9NY74 926 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 ORC3Q9UBD5 711 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 ADAM29Q9UKF5 820 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 CA14Q9ULX7 337 aa4.12□□□□□ -1.75
UBE2F-221ENST00000480828 RRP7AQ9Y3A4 280 aaKnown RBP4.12□□□□□ -1.75
UBE2F-221ENST00000480828 A0A087X0M5 115 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 PNMA6EA0A0J9YXQ4 647 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 A0A1B0GX30 115 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 FAM90A18PA6NE21 464 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 FAM90A16PA6NEW6 464 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 FAM90A9PA6NNJ1 464 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 FAM90A5PA8MXJ8 464 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 KIF28PB7ZC32 967 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 STX16-NPEPL1H3BU86 382 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 STX16O14662 325 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 SPTLC2O15270 562 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 GPR42O15529 346 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 ZSCAN9O15535 394 aaPredicted RBP4.11□□□□□ -1.75
UBE2F-221ENST00000480828 AHCYL1O43865 530 aa4.11□□□□□ -1.75
UBE2F-221ENST00000480828 USO1O60763 962 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms