RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 TDRPQ86YL5 185 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 HAUS1Q96CS2 278 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 MLXIPLQ9NP71 852 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 HAUS2Q9NVX0 235 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHKB-208ENST00000479003 CYTH4Q9UIA0 394 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 KRT3P12035 628 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 CD19P15391 556 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 GCAP28676 217 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 GSCP56915 257 aaPredicted RBP28.84■■■□□ 2.21
CHKB-208ENST00000479003 CATSPER4Q7RTX7 472 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 FAXDC2Q96IV6 333 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 NKIRAS1Q9NYS0 192 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 SHOC2Q9UQ13 582 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 GOLGA8SH3BPF8 625 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 STAG3L1P0CL83 205 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 NR1H3Q13133 447 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 SNX17Q15036 470 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 NUGGCQ68CJ6 796 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 PPP1R21Q6ZMI0 780 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 ARFGAP1Q8N6T3 406 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 JOSD2Q8TAC2 188 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 MAGEB18Q96M61 343 aa28.83■■■□□ 2.21
CHKB-208ENST00000479003 RPF1Q9H9Y2 349 aaKnown RBP28.83■■■□□ 2.21
CHKB-208ENST00000479003 EXOC1LA0A1B0GW35 172 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 STX2P32856 288 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 RAP1GAPP47736 663 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 TMED2Q15363 201 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 ZNF667Q5HYK9 610 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 GDAP1Q8TB36 358 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 WNT8BQ93098 351 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 SIX4Q9UIU6 781 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 PTCH2Q9Y6C5 1203 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 RASA4BC9J798 803 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 ALOX15BO15296 676 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 RASA4O43374 803 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 LRCH4O75427 683 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 KRT7P08729 469 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 RAD23BP54727 409 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 TAF2Q6P1X5 1199 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 SLAIN1Q8ND83 568 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 SGSM3Q96HU1 749 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 TMEM121Q9BTD3 319 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 FRMD8P1Q9BZ68 369 aaPredicted RBP28.82■■■□□ 2.2
CHKB-208ENST00000479003 WDR35Q9P2L0 1181 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 TJP2Q9UDY2 1190 aa28.82■■■□□ 2.2
CHKB-208ENST00000479003 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.82■■■□□ 2.2
CHKB-208ENST00000479003 GRK4P32298 578 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 TAZQ16635 292 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 CYB5D1Q6P9G0 228 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 PRCCQ92733 491 aaPredicted RBP28.81■■■□□ 2.2
CHKB-208ENST00000479003 TRIM17Q9Y577 477 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 SGK1O00141 431 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 SUN1O94901 812 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 KRT19P08727 400 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 PSMC1P62191 440 aaKnown RBP28.81■■■□□ 2.2
CHKB-208ENST00000479003 FASTKD3Q14CZ7 662 aaKnown RBP28.81■■■□□ 2.2
CHKB-208ENST00000479003 TRABD2AQ86V40 505 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 PCSK9Q8NBP7 692 aaKnown RBP28.81■■■□□ 2.2
CHKB-208ENST00000479003 TGS1Q96RS0 853 aaKnown RBP28.81■■■□□ 2.2
CHKB-208ENST00000479003 SDCBP2Q9H190 292 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 UBN1Q9NPG3 1134 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 ABCF3Q9NUQ8 709 aa28.81■■■□□ 2.2
CHKB-208ENST00000479003 IL1R2P27930 398 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 MNAT1P51948 309 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 PLCB3Q01970 1234 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 HADHQ16836 314 aaKnown RBP28.8■■■□□ 2.2
CHKB-208ENST00000479003 SWT1Q5T5J6 900 aaKnown RBP28.8■■■□□ 2.2
CHKB-208ENST00000479003 CENPUQ71F23 418 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 RNF180Q86T96 592 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 NME8Q8N427 588 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 ADPGKQ9BRR6 497 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 ZWILCHQ9H900 591 aa28.8■■■□□ 2.2
CHKB-208ENST00000479003 ARHGEF6Q15052 776 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 BBS12Q6ZW61 710 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 PCGF5Q86SE9 256 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 XYLT1Q86Y38 959 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 C1orf127Q8N9H9 656 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 TTC13Q8NBP0 860 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 FARP1Q9Y4F1 1045 aaPredicted RBP28.79■■■□□ 2.2
CHKB-208ENST00000479003 FAM47DPA6NHR8 397 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 NFICP08651 508 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 CRYBB1P53674 252 aaPredicted RBP28.79■■■□□ 2.2
CHKB-208ENST00000479003 CDH8P55286 799 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 OTUD4Q01804 1114 aaKnown RBP28.79■■■□□ 2.2
CHKB-208ENST00000479003 LHX8Q68G74 356 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 SLC4A11Q8NBS3 891 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 ACTL9Q8TC94 416 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 CPXM1Q96SM3 734 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 PPCSQ9HAB8 311 aa28.79■■■□□ 2.2
CHKB-208ENST00000479003 IFNB1P01574 187 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 KDELR1P24390 212 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 ZNF268Q14587 947 aaPredicted RBP28.78■■■□□ 2.2
CHKB-208ENST00000479003 SPATA21Q7Z572 469 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 SERINC5Q86VE9 423 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 EIF2AQ9BY44 585 aaKnown RBP28.78■■■□□ 2.2
CHKB-208ENST00000479003 PHACTR1Q9C0D0 580 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 LACTBL1A8MY62 500 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 NPTXRO95502 500 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 SMTNL2Q2TAL5 461 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms