RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SEPT6Q14141 434 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 PPP1R2P3Q6NXS1 205 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 ANLNQ9NQW6 1124 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 OLFML3Q9NRN5 406 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 NOCTQ9UK39 431 aaKnown RBP22.1■■□□□ 1.13
SDF4-206ENST00000478938 COPAP53621 1224 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 ALCAMQ13740 583 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 BMT2Q1RMZ1 405 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 RARS2Q5T160 578 aaKnown RBP22.09■■□□□ 1.13
SDF4-206ENST00000478938 SLC47A2Q86VL8 602 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 RDH13Q8NBN7 331 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 LMO3Q8TAP4 145 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 DHRS4Q9BTZ2 278 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 ANO3Q9BYT9 981 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 PSMD13Q9UNM6 376 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 NUB1Q9Y5A7 615 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 SOBPA7XYQ1 873 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 TKTP29401 623 aaKnown RBP22.09■■□□□ 1.13
SDF4-206ENST00000478938 CTBSQ01459 385 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 C16orf87Q6PH81 154 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 XKR5Q6UX68 686 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 CDHR3Q6ZTQ4 885 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 NYXQ9GZU5 481 aa22.09■■□□□ 1.13
SDF4-206ENST00000478938 C6orf203Q9P0P8 240 aaPredicted RBP22.09■■□□□ 1.13
SDF4-206ENST00000478938 PABPC1P11940 636 aaKnown RBP22.08■■□□□ 1.13
SDF4-206ENST00000478938 HMOX2P30519 316 aa22.08■■□□□ 1.13
SDF4-206ENST00000478938 NDST2P52849 883 aa22.08■■□□□ 1.13
SDF4-206ENST00000478938 EGFLAMQ63HQ2 1017 aa22.08■■□□□ 1.13
SDF4-206ENST00000478938 CLVS1Q8IUQ0 354 aaPredicted RBP22.08■■□□□ 1.13
SDF4-206ENST00000478938 LRGUKQ96M69 825 aa22.08■■□□□ 1.13
SDF4-206ENST00000478938 HGH1Q9BTY7 390 aa22.08■■□□□ 1.13
SDF4-206ENST00000478938 TMA7Q9Y2S6 64 aaKnown RBP22.08■■□□□ 1.13
SDF4-206ENST00000478938 ESYT2A0FGR8 921 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 CCDC162PA2VCL2 907 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 CYP2A13Q16696 494 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 ZNF829Q3KNS6 432 aaPredicted RBP22.08■■□□□ 1.12
SDF4-206ENST00000478938 MSS51Q4VC12 460 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 SBK1Q52WX2 424 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 C7orf26Q96N11 449 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 C20orf27Q9GZN8 174 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 DNPEPQ9ULA0 475 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 PPME1Q9Y570 386 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 IVNS1ABPQ9Y6Y0 642 aa22.08■■□□□ 1.12
SDF4-206ENST00000478938 GZMAP12544 262 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 NMT1P30419 496 aaKnown RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 RPS3AP61247 264 aaKnown RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 FMO1Q01740 532 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 CHRNDQ07001 517 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 LMBRD2Q68DH5 695 aaPredicted RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 ZBTB46Q86UZ6 589 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 RAVER1Q8IY67 606 aaKnown RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 ISOC1Q96CN7 298 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 OSBPL10Q9BXB5 764 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 NUF2Q9BZD4 464 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 SDR42E2A6NKP2 422 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 J3QRK9 145 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 KLF11O14901 512 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 CSDE1O75534 798 aaKnown RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 ZMPSTE24O75844 475 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 FBXO21O94952 628 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 CHI3L2Q15782 390 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 SPOPLQ6IQ16 392 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 LLGL2Q6P1M3 1020 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 KRT27Q7Z3Y8 459 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 DNAJC10Q8IXB1 793 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 CHPT1Q8WUD6 406 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 SREK1Q8WXA9 508 aaKnown RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 FBXL8Q96CD0 374 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 TRIM11Q96F44 468 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 TRIM56Q9BRZ2 755 aaKnown RBP22.07■■□□□ 1.12
SDF4-206ENST00000478938 ACSS3Q9H6R3 686 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 RNF11Q9Y3C5 154 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 KIAA1551Q9HCM1 1747 aa22.07■■□□□ 1.12
SDF4-206ENST00000478938 PSMD12O00232 456 aaPredicted RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 CD58P19256 250 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 ITGAXP20702 1163 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 RNASEH2BQ5TBB1 312 aaKnown RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 FBXW8Q8N3Y1 598 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 OGFOD1Q8N543 542 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 RPGRQ92834 1020 aaKnown RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 ATP2A3Q93084 1043 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 EME1Q96AY2 570 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 C12orf43Q96C57 262 aaKnown RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 NSUN4Q96CB9 384 aaKnown RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 WDR83Q9BRX9 315 aaKnown RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 SLC2A11Q9BYW1 496 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 COPS7BQ9H9Q2 264 aaPredicted RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 KLHL11Q9NVR0 708 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 GIN1Q9NXP7 522 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 VPS51Q9UID3 782 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 ATP2A1O14983 1001 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A9O60656 530 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 BAIAP3O94812 1187 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A6P19224 532 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A1P22309 533 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A4P22310 534 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A3P35503 534 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A5P35504 534 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms