RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 ZNF365Q70YC5 407 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 UBE3BQ7Z3V4 1068 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 POLNQ7Z5Q5 900 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 DPP9Q86TI2 863 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 XYLT1Q86Y38 959 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 APOBEC3FQ8IUX4 373 aaKnown RBP6.9□□□□□ -1.3
SSR3-207ENST00000478842 D2HGDHQ8N465 521 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 MDGA1Q8NFP4 955 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 MIEF2Q96C03 454 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 PGBD4Q96DM1 585 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 FAM89AQ96GI7 184 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 ZC3H10Q96K80 434 aaKnown RBP6.9□□□□□ -1.3
SSR3-207ENST00000478842 PLEKHF1Q96S99 279 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 C1orf43Q9BWL3 253 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 TSPYL4Q9UJ04 414 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 MED16Q9Y2X0 877 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 SH3BP1Q9Y3L3 701 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 RHPN2P1A8MT19 583 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 TPD52L2O43399 206 aaKnown RBP6.89□□□□□ -1.31
SSR3-207ENST00000478842 GNAI2P04899 355 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 GJB1P08034 283 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 SBK3P0C264 359 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 KITP10721 976 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 RARBP10826 455 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 BRAFP15056 766 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 MSX2P35548 267 aaPredicted RBP6.89□□□□□ -1.31
SSR3-207ENST00000478842 KCNJ5P48544 419 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 MXRA7P84157 204 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 CRHR2Q13324 411 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 CNGA2Q16280 664 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 LONRF1Q17RB8 773 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 DCAF17Q5H9S7 520 aaPredicted RBP6.89□□□□□ -1.31
SSR3-207ENST00000478842 STRIP1Q5VSL9 837 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 FAM186BQ8IYM0 893 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 FITM2Q8N6M3 262 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 ACRBPQ8NEB7 543 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 OR52N2Q8NGI0 321 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 CD99L2Q8TCZ2 262 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 MORC4Q8TE76 937 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 APOL5Q9BWW9 433 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 XYLT2Q9H1B5 865 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 PRKRIP1Q9H875 184 aaPredicted RBP6.89□□□□□ -1.31
SSR3-207ENST00000478842 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.89□□□□□ -1.31
SSR3-207ENST00000478842 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.89□□□□□ -1.31
SSR3-207ENST00000478842 SNX13Q9Y5W8 968 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 XDHP47989 1333 aa6.89□□□□□ -1.31
SSR3-207ENST00000478842 A0A0C4DFX4 3053 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 MED23Q9ULK4 1368 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 A0A1W2PPC1 479 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 OTOL1A6NHN0 477 aaPredicted RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 EIF3JO75822 258 aaKnown RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 AHSGP02765 367 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 THP07101 528 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 MYL3P08590 195 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 ALDH5A1P51649 535 aaPredicted RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 NOMO3P69849 1222 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 BTKQ06187 659 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 EXOSC9Q06265 439 aaKnown RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 FOXL1Q12952 345 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 SLC4A8Q2Y0W8 1093 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 SLC9C1Q4G0N8 1177 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 SLC44A4Q53GD3 710 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 ZNF783Q6ZMS7 281 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 TOGARAM2Q6ZUX3 1019 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 SRLQ86TD4 932 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 GSPT2Q8IYD1 628 aaKnown RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 ELOA2Q8IYF1 753 aaPredicted RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 FUKQ8N0W3 1084 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 OR6B3Q8NGW1 331 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 ZBED3Q96IU2 234 aaPredicted RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 CCDC138Q96M89 665 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 TRIM54Q9BYV2 358 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 UNKQ9C0B0 810 aaKnown RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 REXO4Q9GZR2 422 aaKnown RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 COA1Q9GZY4 146 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 GSTO2Q9H4Y5 243 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 PARD6AQ9NPB6 346 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 SLAMF7Q9NQ25 335 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 PADI4Q9UM07 663 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 SCAF8Q9UPN6 1271 aaKnown RBP6.88□□□□□ -1.31
SSR3-207ENST00000478842 CUL9Q8IWT3 2517 aa6.88□□□□□ -1.31
SSR3-207ENST00000478842 RANBP2P49792 3224 aaKnown RBP6.87□□□□□ -1.31
SSR3-207ENST00000478842 TBX3O15119 743 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 CHEK2O96017 543 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 HOXB7P09629 217 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
SSR3-207ENST00000478842 PIK3CBP42338 1070 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 ARFIP2P53365 341 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 PRMT2P55345 433 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 FMO1Q01740 532 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 PRKG1Q13976 671 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
SSR3-207ENST00000478842 SUPT20HL1Q3ZLR7 823 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 CCDC152Q4G0S7 254 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 PARD3BQ8TEW8 1205 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 SCAMP4Q969E2 229 aa6.87□□□□□ -1.31
SSR3-207ENST00000478842 MSLNLQ96KJ4 702 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms