RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 DDIASQ8IXT1 998 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DENND1AQ8TEH3 1009 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 LRRC58Q96CX6 371 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 MED15Q96RN5 788 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 KLHL1Q9NR64 748 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PANK4Q9NVE7 773 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PSMC3IPQ9P2W1 217 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 WASF2Q9Y6W5 498 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ARHGEF33A8MVX0 844 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 PHF20L1A8MW92 1017 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TMEM114B3SHH9 223 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 C6P13671 934 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 COX7A2P14406 83 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 PVALBP20472 110 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 ITGALP20701 1170 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 DRG2P55039 364 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 KCNK10P57789 538 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TDGQ13569 410 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 FAM199XQ6PEV8 388 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 KLHL17Q6TDP4 642 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 QSOX2Q6ZRP7 698 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TAS2R42Q7RTR8 314 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ALDH16A1Q8IZ83 802 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 NEK9Q8TD19 979 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SYTL5Q8TDW5 730 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 PANK1Q8TE04 598 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 NANSQ9NR45 359 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 CRNNQ9UBG3 495 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 PCDHB9Q9Y5E1 797 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 HEATR9A2RTY3 570 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 M0QYT0 321 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SNAP91O60641 907 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ITIH1P19827 911 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 NFX1Q12986 1120 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 PCID2Q5JVF3 399 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ADCK2Q7Z695 626 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 EID3Q8N140 333 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SNAPC3Q92966 411 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 NSMCE2Q96MF7 247 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TRPS1Q9UHF7 1281 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ST3GAL5Q9UNP4 418 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 MGAT4DA6NG13 374 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 FGFR2P21802 821 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TLX1P31314 330 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 SCNN1BP51168 640 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 HSF2Q03933 536 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 RBBP4Q09028 425 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 BST2Q10589 180 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 SCGB2A2Q13296 93 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 STARD3Q14849 445 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 MIIPQ5JXC2 388 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SPESP1Q6UW49 350 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ZBTB49Q6ZSB9 765 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 C2CD5Q86YS7 1000 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ZNF513Q8N8E2 541 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 YIPF3Q9GZM5 350 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 LRMDAQ9H2I8 198 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ARL8BQ9NVJ2 186 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 INTS10Q9NVR2 710 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 FBXO9Q9UK97 447 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 SMG5Q9UPR3 1016 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 ADGRG1Q9Y653 693 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 MDFIC2A0A1B0GVS7 189 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 BCLAF3A2AJT9 711 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 F8VZ95 297 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ASMTLO95671 621 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 STAG3L1P0CL83 205 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 NPR2P20594 1047 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 CXCR2P25025 360 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TLE3Q04726 772 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 EEF1A2Q05639 463 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 RHEBQ15382 184 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 LRRC36Q1X8D7 754 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 CCNYL2Q5T2Q4 361 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 IQSEC1Q6DN90 963 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 STRA8Q7Z7C7 330 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 FAM160B2Q86V87 743 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 U2AF1L4Q8WU68 220 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 SGSM3Q96HU1 749 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TMEM168Q9H0V1 697 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TRMT6Q9UJA5 497 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 ABT1Q9ULW3 272 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 ANGEL1Q9UNK9 670 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 TNFSF13BQ9Y275 285 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 OR14I1A6ND48 311 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 POC1B-GALNT4F8VUJ3 575 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ATP9BO43861 1147 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 MAGEC1O60732 1142 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 USP1O94782 785 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 KCNH1O95259 989 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 LPIN1Q14693 890 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 HLFQ16534 295 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 LONRF3Q496Y0 759 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 RESP18Q5W5W9 173 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TMC3Q7Z5M5 1100 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 GPBP1Q86WP2 473 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ADSSL1Q8N142 457 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 L3MBTL2Q969R5 705 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 HIPK2Q9H2X6 1198 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SEPT9Q9UHD8 586 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms