RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 MED10Q9BTT4 135 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 GOLPH3LQ9H4A5 285 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 MAPK8IP1Q9UQF2 711 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 EML5Q05BV3 1969 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 DRD1P21728 446 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 SPEM2Q0P670 501 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 DPYDQ12882 1025 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 ORC1Q13415 861 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 C1orf220Q5T0J3 134 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 SPOPLQ6IQ16 392 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 PAQR9Q6ZVX9 377 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 SV2AQ7L0J3 742 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 ACOT1Q86TX2 421 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 FAM35AQ86V20 835 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 NUP93Q8N1F7 819 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 GPR161Q8N6U8 529 aaKnown RBP24.26■■□□□ 1.47
C9orf3-216ENST00000478603 TMC2Q8TDI7 906 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 EZH1Q92800 747 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-216ENST00000478603 CD101Q93033 1021 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 SLITRK1Q96PX8 696 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 GDPD2Q9HCC8 539 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.26■■□□□ 1.475e-17■■■■■ 409.9
C9orf3-216ENST00000478603 SMPD4Q9NXE4 827 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 FRMD4BQ9Y2L6 1034 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 CPQQ9Y646 472 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 SPAG17Q6Q759 2223 aa24.26■■□□□ 1.47
C9orf3-216ENST00000478603 SCAMP3O14828 347 aaKnown RBP24.25■■□□□ 1.47
C9orf3-216ENST00000478603 CALUO43852 315 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-216ENST00000478603 RHOBTB3O94955 611 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 OAS1P00973 400 aaKnown RBP24.25■■□□□ 1.47
C9orf3-216ENST00000478603 PFKLP17858 780 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 YWHAQP27348 245 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 HOXA6P31267 233 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 CNR2P34972 360 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 PPP3CCP48454 512 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 SLC7A9P82251 487 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 PUM1Q14671 1186 aaKnown RBP eCLIP24.25■■□□□ 1.47
C9orf3-216ENST00000478603 KRBA2Q6ZNG9 492 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 DGLUCYQ7Z3D6 616 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 WDR5BQ86VZ2 330 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 DLL3Q9NYJ7 618 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 HMGXB4Q9UGU5 601 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 SLC8A2Q9UPR5 921 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 TRAF3IP3Q9Y228 551 aa24.25■■□□□ 1.47
C9orf3-216ENST00000478603 ATG13O75143 517 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 OLFM2O95897 454 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 SGSM1Q2NKQ1 1148 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 CEP68Q76N32 757 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.24■■□□□ 1.47
C9orf3-216ENST00000478603 SCAMP5Q8TAC9 235 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 FBXO32Q969P5 355 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 CCDC47Q96A33 483 aaKnown RBP24.24■■□□□ 1.47
C9orf3-216ENST00000478603 TNIP3Q96KP6 325 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 SCAND2PQ9GZW5 306 aaPredicted RBP24.24■■□□□ 1.47
C9orf3-216ENST00000478603 ATP8B3O60423 1300 aa24.24■■□□□ 1.47
C9orf3-216ENST00000478603 DNAH14Q0VDD8 3507 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 CACNA1AO00555 2505 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 NFATC1O95644 943 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 HLA-DRAP01903 254 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 RETP07949 1114 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 CCDC130P13994 396 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 NR2F2P24468 414 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 PIK3CAP42336 1068 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 VAMP7P51809 220 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 NDST1P52848 882 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 NR1H3Q13133 447 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 FILIP1Q7Z7B0 1213 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 FUKQ8N0W3 1084 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 RPLP0P6Q8NHW5 317 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 EXOC4Q96A65 974 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 KRT82Q9NSB4 513 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 CHORDC1Q9UHD1 332 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-216ENST00000478603 ATP6V1DQ9Y5K8 247 aa24.23■■□□□ 1.47
C9orf3-216ENST00000478603 A0A1W2PQ27 194 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 A0A1W2PQ64 194 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 A0A1W2PQD8 194 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 IKBKBO14920 756 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 AP1G2O75843 785 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 AKAP3O75969 853 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 RTN3O95197 1032 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-216ENST00000478603 ASS1P00966 412 aaKnown RBP24.22■■□□□ 1.47
C9orf3-216ENST00000478603 TRIM49P0CI25 452 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 TRIM49CP0CI26 452 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 MBL2P11226 248 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-216ENST00000478603 P4HA1P13674 534 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 SLC5A3P53794 718 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 FBXO43Q4G163 708 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 FAM160A2Q8N612 972 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-216ENST00000478603 SMARCD1Q96GM5 515 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 HHIPQ96QV1 700 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 DMAP1Q9NPF5 467 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-216ENST00000478603 CFAP97Q9P2B7 532 aa24.22■■□□□ 1.47
C9orf3-216ENST00000478603 TNFRSF10BO14763 440 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 BEST1O76090 585 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 ZNF202O95125 648 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 KIF20AO95235 890 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 OPRD1P41143 372 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 ASPAP45381 313 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 LMNB2Q03252 620 aa24.21■■□□□ 1.47
C9orf3-216ENST00000478603 GAB4Q2WGN9 574 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms