RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 HNRNPABQ99729 332 aaKnown RBP12.36□□□□□ -0.43
PDCD11-204ENST00000478543 TCF25Q9BQ70 676 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 APOL5Q9BWW9 433 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 IRF2BPLQ9H1B7 796 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 S1PR5Q9H228 398 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 ABI2Q9NYB9 513 aaPredicted RBP12.36□□□□□ -0.43
PDCD11-204ENST00000478543 STK39Q9UEW8 545 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 LZTS1Q9Y250 596 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 CEP83Q9Y592 693 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
PDCD11-204ENST00000478543 NCOR2Q9Y618 2525 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 AP1G2O75843 785 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 IPO7O95373 1038 aaKnown RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 CYP1A1P04798 512 aaPredicted RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 FAM200BP0CF97 657 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 BDNFP23560 247 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 MAGEA1P43355 309 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 RGS7P49802 495 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 BCAT1P54687 386 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 NOMO3P69849 1222 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 ROR1Q01973 937 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 PDE4CQ08493 712 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 MAPRE1Q15691 268 aaKnown RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 C4orf50Q6ZRC1 276 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 TMEM35BQ8NCS4 154 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 MICAL1Q8TDZ2 1067 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 NKD2Q969F2 451 aaPredicted RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 CLSTN3Q9BQT9 956 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 OXCT2Q9BYC2 517 aaPredicted RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 CYTH4Q9UIA0 394 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 NENFQ9UMX5 172 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
PDCD11-204ENST00000478543 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 EPG5Q9HCE0 2579 aa12.35□□□□□ -0.43
PDCD11-204ENST00000478543 WDR27A2RRH5 827 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 MTMR11A4FU01 709 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 TULP2O00295 520 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 PIK3R2O00459 728 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 RTN2O75298 545 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 BEST1O76090 585 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 LSM8O95777 96 aaKnown RBP12.34□□□□□ -0.43
PDCD11-204ENST00000478543 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
PDCD11-204ENST00000478543 ABCB4P21439 1286 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 CYP2F1P24903 491 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 GPD2P43304 727 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
PDCD11-204ENST00000478543 CACNA2D1P54289 1103 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 MAP3K7CLP57077 242 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 CREMQ03060 361 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 UBE3AQ05086 875 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 GPR17Q13304 367 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
PDCD11-204ENST00000478543 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
PDCD11-204ENST00000478543 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 C2CD6Q53TS8 623 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SLC8B1Q6J4K2 584 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 CLEC20AQ6ZU45 233 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 PHLDB2Q86SQ0 1253 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SCN4BQ8IWT1 228 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 WDTC1Q8N5D0 677 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 FEZF2Q8TBJ5 459 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SMOQ99835 787 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 DUSP16Q9BY84 665 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 LHX5Q9H2C1 402 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDCD11-204ENST00000478543 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 TFR2Q9UP52 801 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 SSX2IPQ9Y2D8 614 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
PDCD11-204ENST00000478543 MYO10Q9HD67 2058 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 A0A0U1RQJ8 604 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 HIDE1A8MVS5 230 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 TEX28O15482 410 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
PDCD11-204ENST00000478543 LILRB3O75022 631 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 SOAT2O75908 522 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 LCA5LO95447 670 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 VNN2O95498 520 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 FTLP02792 175 aaPredicted RBP12.33□□□□□ -0.44
PDCD11-204ENST00000478543 CNPP09543 421 aaKnown RBP12.33□□□□□ -0.44
PDCD11-204ENST00000478543 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 GZMAP12544 262 aa12.33□□□□□ -0.44
PDCD11-204ENST00000478543 NPR3P17342 541 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms