RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 NOMO3P69849 1222 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 ITIH3Q06033 890 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 KLHL30Q0D2K2 578 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 PDCLQ13371 301 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 SKIV2LQ15477 1246 aaKnown RBP21.05■□□□□ 0.96
ACTB-210ENST00000477812 EP400NLQ6ZTU2 488 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 DENND5BQ6ZUT9 1274 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 ITIH5Q86UX2 942 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 NUP93Q8N1F7 819 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 C1orf131Q8NDD1 294 aaKnown RBP21.05■□□□□ 0.96
ACTB-210ENST00000477812 SCAMP5Q8TAC9 235 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 HLA-CQ95604 372 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 APOL5Q9BWW9 433 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 SLC4A5Q9BY07 1137 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 IL21Q9HBE4 155 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 DNMT3BQ9UBC3 853 aaKnown RBP21.05■□□□□ 0.96
ACTB-210ENST00000477812 CD207Q9UJ71 328 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 USP3Q9Y6I4 520 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 NRG2O14511 850 aaPredicted RBP21.04■□□□□ 0.96
ACTB-210ENST00000477812 PLEKP08567 350 aaPredicted RBP21.04■□□□□ 0.96
ACTB-210ENST00000477812 CSH1P0DML2 217 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 CSH2P0DML3 217 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 FECHP22830 423 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 TRIM72Q6ZMU5 477 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 HS6ST3Q8IZP7 471 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 SPC24Q8NBT2 197 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 SUSD6Q92537 303 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 HSFY1Q96LI6 401 aa21.04■□□□□ 0.96
ACTB-210ENST00000477812 ZNF512Q96ME7 567 aaPredicted RBP21.04■□□□□ 0.96
ACTB-210ENST00000477812 AVENQ9NQS1 362 aaPredicted RBP21.04■□□□□ 0.96
ACTB-210ENST00000477812 BZW2Q9Y6E2 419 aaKnown RBP21.04■□□□□ 0.96
ACTB-210ENST00000477812 RHOP08100 348 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 UNGP13051 313 aaPredicted RBP21.03■□□□□ 0.96
ACTB-210ENST00000477812 RGS7P49802 495 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 NTHL1P78549 312 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 CLUL1Q15846 466 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 GRASPQ7Z6J2 395 aaPredicted RBP21.03■□□□□ 0.96
ACTB-210ENST00000477812 TMEM150AQ86TG1 271 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 ELMOD1Q8N336 334 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 TMEM35BQ8NCS4 154 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 SLC30A5Q8TAD4 765 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 CPXM1Q96SM3 734 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 COMMD8Q9NX08 183 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 COG5Q9UP83 839 aa21.03■□□□□ 0.96
ACTB-210ENST00000477812 GRXCR2A6NFK2 248 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 DDX3XO00571 662 aaKnown RBP eCLIP21.02■□□□□ 0.961e-323■□□□□ 8.9
ACTB-210ENST00000477812 TADA3O75528 432 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 RTN3O95197 1032 aaPredicted RBP21.02■□□□□ 0.96
ACTB-210ENST00000477812 PTPN2P17706 415 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 CCR2P41597 374 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 CDK17Q00537 523 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 CLEC16AQ2KHT3 1053 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 SLC5A9Q2M3M2 681 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 LEXMQ3ZCV2 418 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 PTPN20Q4JDL3 420 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 PRSS36Q5K4E3 855 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 NAA35Q5VZE5 725 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 BHLHA9Q7RTU4 235 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 TMEM110Q86TL2 294 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 PANX2Q96RD6 677 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 CORO1BQ9BR76 489 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 CYLDQ9NQC7 956 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 PRDM6Q9NQX0 595 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 ASAH2Q9NR71 780 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 TJP2Q9UDY2 1190 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 USP15Q9Y4E8 981 aaPredicted RBP21.02■□□□□ 0.96
ACTB-210ENST00000477812 CEP83Q9Y592 693 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 DENND4AQ7Z401 1863 aa21.02■□□□□ 0.96
ACTB-210ENST00000477812 NCANO14594 1321 aa21.02■□□□□ 0.95
ACTB-210ENST00000477812 ZNF638Q14966 1978 aaKnown RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 MOSPD3O75425 235 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 CENPCQ03188 943 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 ADIGQ0VDE8 80 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 MAPK8IP2Q13387 824 aaPredicted RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 SMAD4Q13485 552 aaKnown RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 ASTE1Q2TB18 679 aaPredicted RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 PABPC1LQ4VXU2 614 aaKnown RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 TDRD12Q587J7 1177 aaKnown RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 PM20D1Q6GTS8 502 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 CES5AQ6NT32 575 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 GAREM2Q75VX8 874 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 CCDC186Q7Z3E2 898 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 SCML4Q8N228 414 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 LEMD2Q8NC56 503 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 CHP1Q99653 195 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 PDCL3Q9H2J4 239 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 PIDD1Q9HB75 910 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 WDR6Q9NNW5 1121 aaKnown RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 EHD2Q9NZN4 543 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 NENFQ9UMX5 172 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 MAGED2Q9UNF1 606 aaPredicted RBP21.01■□□□□ 0.95
ACTB-210ENST00000477812 SCML2Q9UQR0 700 aa21.01■□□□□ 0.95
ACTB-210ENST00000477812 SSU72P8A0A1W2PR75 194 aa21■□□□□ 0.95
ACTB-210ENST00000477812 E5RJQ4 531 aa21■□□□□ 0.95
ACTB-210ENST00000477812 F11P03951 625 aa21■□□□□ 0.95
ACTB-210ENST00000477812 ZDHHC11BP0C7U3 371 aa21■□□□□ 0.95
ACTB-210ENST00000477812 YWHAQP27348 245 aa21■□□□□ 0.95
ACTB-210ENST00000477812 TKTL1P51854 596 aa21■□□□□ 0.95
ACTB-210ENST00000477812 TAF10Q12962 218 aa21■□□□□ 0.95
ACTB-210ENST00000477812 CPA5Q8WXQ8 436 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms