RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 KRT28Q7Z3Y7 464 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 CAGE1Q8TC20 777 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 POF1BQ8WVV4 589 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 CRB3Q9BUF7 120 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 ACTRT3Q9BYD9 372 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 SYNPO2LQ9H987 977 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 GJB4Q9NTQ9 266 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 CDC23Q9UJX2 597 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 MAGED2Q9UNF1 606 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 MAN2B2Q9Y2E5 1009 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 TBC1D30Q9Y2I9 924 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 ADGRA2Q96PE1 1338 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 LOC102724159A0A0B4J2E5 919 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 H7C4K7 107 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 RGS10O43665 173 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 PLA2G6O60733 806 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 RASAL1O95294 804 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 PTDSS1P48651 473 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 SIM1P81133 766 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 MYO1EQ12965 1108 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 PWP2Q15269 919 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 PDCD2Q16342 344 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 TXNRD1Q16881 649 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 MPEG1Q2M385 716 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 SLC35G1Q2M3R5 365 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 TEDDM1Q5T9Z0 273 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 VPS53Q5VIR6 699 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 PLAG1Q6DJT9 500 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 FBXO38Q6PIJ6 1188 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 USP17L6PQ6QN14 398 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 TSHZ1Q6ZSZ6 1077 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 DTX2Q86UW9 622 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 ZNF280BQ86YH2 543 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 SPARTQ8N0X7 666 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 ZNF527Q8NB42 609 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 BPIFB1Q8TDL5 484 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 PBKQ96KB5 322 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 SNX27Q96L92 541 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 HEYLQ9NQ87 328 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 TM7SF3Q9NS93 570 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 CDY1Q9Y6F8 540 aa5.48□□□□□ -1.53
SMNDC1-205ENST00000477763 ADM5C9JUS6 153 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 FFAR2O15552 330 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 TCEA3O75764 348 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 KCNA3P22001 575 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 PRKAR1BP31321 381 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 IL6STP40189 918 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 GRIA3P42263 894 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 COPAP53621 1224 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 ZRSR2Q15696 482 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 SMN1Q16637 294 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 ARHGAP40Q5TG30 622 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 CACHD1Q5VU97 1274 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 FCRL6Q6DN72 434 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 MZT2AQ6P582 158 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 SLC15A3Q8IY34 581 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 SIMC1Q8NDZ2 872 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 FKBP10Q96AY3 582 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 TTLL2Q9BWV7 592 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 DKK4Q9UBT3 224 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 INSL6Q9Y581 213 aa5.47□□□□□ -1.53
SMNDC1-205ENST00000477763 A0A087WV62 115 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 ZAR1LA6NP61 321 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 hCG_1984214I3L0E3 225 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 RRP9O43818 475 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 TLR5O60602 858 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 PIAS2O75928 621 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 CHRM2P08172 466 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 TRAPPC10P48553 1259 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 CACNA2D1P54289 1103 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 ICA1Q05084 483 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 RGS7BPQ6MZT1 257 aaPredicted RBP5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 PEG10Q86TG7 708 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 CYP2W1Q8TAV3 490 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 ATRIPQ8WXE1 791 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 TFAP2BQ92481 460 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 MUL1Q969V5 352 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 DUSP26Q9BV47 211 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 STK33Q9BYT3 514 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 TRIM5Q9C035 493 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 PTPRHQ9HD43 1115 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 EHD3Q9NZN3 535 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 SLC17A6Q9P2U8 582 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 C11orf21Q9P2W6 132 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 DNMT3BQ9UBC3 853 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 SLC39A10Q9ULF5 831 aa5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 NDRG4Q9ULP0 352 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 MRPS17Q9Y2R5 130 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-205ENST00000477763 hCG_1642624A0A1W2PR95 340 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 VWC2LB2RUY7 222 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 PODXLO00592 558 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 KCNQ3O43525 872 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 COQ9O75208 318 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 NXPH3O95157 252 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 RHOP08100 348 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 BMP5P22003 454 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 PLA2G5P39877 138 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 CLK3P49761 638 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms