RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GRK4P32298 578 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 CDKN2BP42772 138 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ZNF135P52742 658 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 AIF1P55008 147 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 FAM189BP81408 668 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 OGDHQ02218 1023 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 SOX4Q06945 474 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 PDE4CQ08493 712 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TRIM32Q13049 653 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TUSC3Q13454 348 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 BYSLQ13895 437 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 LPIN1Q14693 890 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 PMF1Q6P1K2 205 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 DCLRE1AQ6PJP8 1040 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 GLB1LQ6UWU2 654 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 C4orf22Q6V702 233 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 DSTYKQ6XUX3 929 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 AGMOQ6ZNB7 445 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 FAM183BPQ6ZVS7 135 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 SLC24A5Q71RS6 500 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TRMT10CQ7L0Y3 403 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 STRADAQ7RTN6 431 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ADAT2Q7Z6V5 191 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 PHLDB2Q86SQ0 1253 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 HOOK3Q86VS8 718 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TTC30AQ86WT1 665 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 RELL1Q8IUW5 271 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 SCML4Q8N228 414 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 KCTD6Q8NC69 237 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 GSTCDQ8NEC7 633 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 JOSD2Q8TAC2 188 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 CD99L2Q8TCZ2 262 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 RXFP2Q8WXD0 754 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ART4Q93070 314 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 SENP8Q96LD8 212 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 GAD1Q99259 594 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ACBD6Q9BR61 282 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 MAK16Q9BXY0 300 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 STMN4Q9H169 189 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 PABPC3Q9H361 631 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 ELAC1Q9H777 363 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 RCOR3Q9P2K3 495 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 USP18Q9UMW8 372 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 CFAP69A5D8W1 941 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ZSCAN5CA6NGD5 496 aaPredicted RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 TMEM189-UBE2V1I3L0A0 370 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 APOC4-APOC2K7ER74 178 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ARVCFO00192 962 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 DNM1LO00429 736 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 HOXA2O43364 376 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 LIASO43766 372 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 RNF40O75150 1001 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 SYF2O95926 243 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 APOC2P02655 101 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 INHAP05111 366 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CTSHP09668 335 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 NUDT17P0C025 328 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 FAM200BP0CF97 657 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 GHRP10912 638 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CAPN2P17655 700 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 MIPP30301 263 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CD52P31358 61 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 STIP1P31948 543 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 GGCXP38435 758 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 MLH1P40692 756 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CDR1P51861 262 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 VCPP55072 806 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 KRT17Q04695 432 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 DHX9Q08211 1270 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 UPP1Q16831 310 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 EMC10Q5UCC4 262 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 AADACL2Q6P093 401 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 LLGL2Q6P1M3 1020 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 TTC27Q6P3X3 843 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 MFSD7Q6UXD7 560 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 BZW1Q7L1Q6 419 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 BEND5Q7L4P6 421 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ZNF598Q86UK7 904 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 GSPT2Q8IYD1 628 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 ZDHHC14Q8IZN3 488 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CNPY4Q8N129 248 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 THEM5Q8N1Q8 247 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ARFGAP2Q8N6H7 521 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 C12orf29Q8N999 325 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 URGCPQ8TCY9 931 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CENPIQ92674 756 aaPredicted RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 APBB2Q92870 758 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 HAUS1Q96CS2 278 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CCDC114Q96M63 670 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 SLC9A7Q96T83 725 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ADAM2Q99965 735 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ZNF670Q9BS34 389 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 TRIM51Q9BSJ1 452 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 DDX23Q9BUQ8 820 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms