RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 DMTF1Q9Y222 760 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 MYH9P35579 1960 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 ZNF862O60290 1169 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 SPAG6O75602 509 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 USP2O75604 605 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 VCLP18206 1134 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 CPA2P48052 419 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 BACE1P56817 501 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 GCNT1Q02742 428 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 TFDP1Q14186 410 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 OASLQ15646 514 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 MON1BQ7L1V2 547 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 ALYREFQ86V81 257 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 SATL1Q86VE3 508 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 TREML1Q86YW5 311 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 MRRFQ96E11 262 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 MRPS26Q9BYN8 205 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 ARMCX1Q9P291 453 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 MYPNQ86TC9 1320 aa15.91■□□□□ 0.14
CLSTN1-205ENST00000477264 ARHGAP10A1A4S6 786 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 USP1O94782 785 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 SERPINA6P08185 405 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 AOC1P19801 751 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 TAS2R40P59535 323 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 MSLNQ13421 630 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 TTLL12Q14166 644 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 MMEL1Q495T6 779 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 NOL9Q5SY16 702 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 LRRC38Q5VT99 294 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 UGT2A3Q6UWM9 527 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 FBXL13Q8NEE6 735 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 PLEKHO2Q8TD55 490 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 TMC2Q8TDI7 906 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 TTC17Q96AE7 1141 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 CCDC106Q9BWC9 280 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 STN1Q9H668 368 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 ACP6Q9NPH0 428 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 IKBKGQ9Y6K9 419 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 C15orf38-AP3S2A0A0A6YYH1 394 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 A0A0J9YVX5 310 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 SMIM18P0DKX4 95 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 CD58P19256 250 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 NOP14P78316 857 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 DEUP1Q05D60 604 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 EFTUD2Q15029 972 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 ADRM1Q16186 407 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 SFT2D3Q587I9 215 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 BORAQ6PGQ7 559 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 ARPINQ7Z6K5 226 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 PRPF39Q86UA1 669 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 NLRX1Q86UT6 975 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 MARVELD2Q8N4S9 558 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 DIS3LQ8TF46 1054 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 SEMA4DQ92854 862 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 NMD3Q96D46 503 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 FAM111AQ96PZ2 611 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 FAM118BQ9BPY3 351 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 CBWD1Q9BRT8 395 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 IQCGQ9H095 443 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 FBXO28Q9NVF7 368 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 TBCCD1Q9NVR7 557 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 MKS1Q9NXB0 559 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 PCDHB2Q9Y5E7 798 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 CSADQ9Y600 493 aa15.9■□□□□ 0.14
CLSTN1-205ENST00000477264 FAM237BA0A1B0GVD1 139 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 C19orf81C9J6K1 198 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 IREB2P48200 963 aaKnown RBP15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 SERPINB8P50452 374 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 DLK2Q6UY11 383 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 RFX8Q6ZV50 586 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 ZNF554Q86TJ5 538 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 ANKMY2Q8IV38 441 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 DAW1Q8N136 415 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 GLIS1Q8NBF1 620 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 ICA1LQ8NDH6 482 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 IP6K2Q9UHH9 426 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 GAS7O60861 476 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 ATP6V1G1O75348 118 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 KRT1P04264 644 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 KRT5P13647 590 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 PTK7Q13308 1070 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 DCTN2Q13561 401 aaKnown RBP15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 C1orf228Q6PIY5 440 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 C3orf62Q6ZUJ4 267 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 GDPD5Q8WTR4 605 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 CLIC5Q9NZA1 410 aa15.89■□□□□ 0.13
CLSTN1-205ENST00000477264 A0A088AWK7 358 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 DENRO43583 198 aaKnown RBP15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 ADRB2P07550 413 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 INHBAP08476 426 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 ZSCAN5DPP0CG00 497 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 SSTR1P30872 391 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 AQP4P55087 323 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 MTA1Q13330 715 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 HP1BP3Q5SSJ5 553 aaPredicted RBP15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 PLEKHA7Q6IQ23 1121 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms