RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ST3GAL1Q11201 340 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 DUSP4Q13115 394 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SPATA1Q5VX52 437 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 PRR23BQ6ZRT6 265 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 CEP68Q76N32 757 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 BRAPQ7Z569 592 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 LONP2Q86WA8 852 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 GPBP1Q86WP2 473 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SPPL2BQ8TCT7 592 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 NETO1Q8TDF5 533 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 CACTINQ8WUQ7 758 aaKnown RBP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 PSMG2Q969U7 264 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 TCEAL4Q96EI5 215 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 ZNF560Q96MR9 790 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 MUC3BQ9H195 1237 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 KIF9Q9HAQ2 790 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SRA1Q9HD15 236 aaKnown RBP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 CEP72Q9P209 647 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 UXTQ9UBK9 157 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 TUBGCP4Q9UGJ1 667 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SLC6A14Q9UN76 642 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 TRIM33Q9UPN9 1127 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SMC3Q9UQE7 1217 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 PP2D1A8MPX8 630 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 LACTBL1A8MY62 500 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ABLIM1O14639 778 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 PAPSS2O95340 614 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 LDHAP00338 332 aaKnown RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 GHRHP01286 108 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 FCARP24071 287 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 CCNE1P24864 410 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 CDC25AP30304 524 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ADH7P40394 386 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 TAF6P49848 677 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 TSPY1Q01534 308 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 FCHO2Q0JRZ9 810 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SIM2Q14190 667 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ZBTB6Q15916 424 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SV2CQ496J9 727 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 GPR158Q5T848 1215 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 CENPPQ6IPU0 288 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 CC2D1AQ6P1N0 951 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 DNAJB7Q7Z6W7 309 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 BPIFB1Q8TDL5 484 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 MMTAG2Q9BU76 263 aaKnown RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 LACRTQ9GZZ8 138 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 TASP1Q9H6P5 420 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 C2CD2Q9Y426 696 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ZNF638Q14966 1978 aaKnown RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 A0A096LPE4 126 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 A0A1W2PPZ6 126 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 CYP11A1P05108 521 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 PDCP20941 246 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 GABRR2P28476 465 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 AVPR1AP37288 418 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 PDE6CP51160 858 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 LILRA4P59901 499 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ALCAMQ13740 583 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 NFE2Q16621 373 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ITPRIPL2Q3MIP1 535 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 MGAT5BQ3V5L5 792 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 TMEM119Q4V9L6 283 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ADALQ6DHV7 355 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 STXBP4Q6ZWJ1 553 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 ARID3BQ8IVW6 561 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 DCLK2Q8N568 766 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 TMEM102Q8N9M5 508 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SHKBP1Q8TBC3 707 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 PLD4Q96BZ4 506 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SENP8Q96LD8 212 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 PGLYRP2Q96PD5 576 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 PLIN2Q99541 437 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SEPT5Q99719 369 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SMG9Q9H0W8 520 aaKnown RBP7.82□□□□□ -1.16
BRCA1-214ENST00000477152 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 EHD2Q9NZN4 543 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 RALGAPA1Q6GYQ0 2036 aa7.82□□□□□ -1.16
BRCA1-214ENST00000477152 A0A0B4J269 797 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 MYBPHLA2RUH7 354 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 MTMR11A4FU01 709 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 SPECC1L-ADORA2AF8WAN1 911 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CYB561D2O14569 222 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 ADRB2P07550 413 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CELA3AP09093 270 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CSH1P0DML2 217 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CSH2P0DML3 217 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CHRNB1P11230 501 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 GAP43P17677 238 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 ADH6P28332 368 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 GJB2P29033 226 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 HOXA6P31267 233 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 VIPR2P41587 438 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CCR2P41597 374 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 RPL10AP62906 217 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 GTF2BQ00403 316 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms