RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TRMT13Q9NUP7 481 aaKnown RBP5.92□□□□□ -1.46
PTCD3-211ENST00000476215 DKK4Q9UBT3 224 aa5.92□□□□□ -1.46
PTCD3-211ENST00000476215 MAN2B2Q9Y2E5 1009 aa5.92□□□□□ -1.46
PTCD3-211ENST00000476215 POLR2AP24928 1970 aaKnown RBP5.92□□□□□ -1.46
PTCD3-211ENST00000476215 ADGRA2Q96PE1 1338 aa5.92□□□□□ -1.46
PTCD3-211ENST00000476215 VWC2LB2RUY7 222 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 MPPED1O15442 326 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 TLR5O60602 858 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 ESRRBO95718 433 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 LDHAP00338 332 aaKnown RBP5.91□□□□□ -1.46
PTCD3-211ENST00000476215 BMP5P22003 454 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 PRKAR1BP31321 381 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 MPP3Q13368 585 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 CCNIQ14094 377 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 CERCAMQ5T4B2 595 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 MAVSQ7Z434 540 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 DTX2Q86UW9 622 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 ABRAQ8N0Z2 381 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 ATRIPQ8WXE1 791 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 GLG1Q92896 1179 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 ALG8Q9BVK2 526 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 TRIM5Q9C035 493 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 FAM83DQ9H4H8 585 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 GLOD4Q9HC38 313 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 LRIT1Q9P2V4 623 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 CDC23Q9UJX2 597 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
PTCD3-211ENST00000476215 ABHD14A-ACY1A0A1B0GW23 586 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 ADM5C9JUS6 153 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 SLC16A3O15427 465 aaKnown RBP5.9□□□□□ -1.46
PTCD3-211ENST00000476215 NDST3O95803 873 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 ERBB2P04626 1255 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 EEF1GP26641 437 aaKnown RBP5.9□□□□□ -1.46
PTCD3-211ENST00000476215 PPM1AP35813 382 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 MPLP40238 635 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 HSPA7P48741 367 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 CLK3P49761 638 aaKnown RBP5.9□□□□□ -1.46
PTCD3-211ENST00000476215 CLCN2P51788 898 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 MRPS35P82673 323 aaKnown RBP5.9□□□□□ -1.46
PTCD3-211ENST00000476215 PTPRRQ15256 657 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 TXNRD1Q16881 649 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 LY6KQ17RY6 165 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 MPEG1Q2M385 716 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 PRR16Q569H4 304 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 TEDDM1Q5T9Z0 273 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 KAZNQ674X7 775 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 IZUMO1Q8IYV9 350 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 EIF2AQ9BY44 585 aaKnown RBP5.9□□□□□ -1.46
PTCD3-211ENST00000476215 PRDM13Q9H4Q3 707 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 EHD3Q9NZN3 535 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 DKK3Q9UBP4 350 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 CAPN11Q9UMQ6 739 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 LRCH1Q9Y2L9 728 aa5.9□□□□□ -1.46
PTCD3-211ENST00000476215 A0A087WZ62 844 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 ZAR1LA6NP61 321 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 CD3EAPO15446 510 aaKnown RBP5.89□□□□□ -1.47
PTCD3-211ENST00000476215 HGFP14210 728 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 COPAP53621 1224 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 ATXN1P54253 815 aaKnown RBP5.89□□□□□ -1.47
PTCD3-211ENST00000476215 GRM1Q13255 1194 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 NBPF8Q3BBV2 869 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 TREML2Q5T2D2 321 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 C10orf62Q5T681 223 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF618Q5T7W0 954 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 KIAA0895LQ68EN5 471 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 FBXO38Q6PIJ6 1188 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 CRTC1Q6UUV9 634 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 SYTL1Q8IYJ3 562 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 ACTRT2Q8TDY3 377 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 ZBTB45Q96K62 511 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-211ENST00000476215 PBKQ96KB5 322 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 CRAMP1Q96RY5 1269 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 C17orf80Q9BSJ5 609 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 HPSEQ9Y251 543 aa5.89□□□□□ -1.47
PTCD3-211ENST00000476215 A1L4Q6 167 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 WDR27A2RRH5 827 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 NXPH3O95157 252 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 VNN1O95497 513 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 FESP07332 822 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 NR2F6P10588 404 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 IDEP14735 1019 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 ZFXP17010 805 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-211ENST00000476215 UQCRC1P31930 480 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 ATICP31939 592 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 LIPAP38571 399 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 TECP42680 631 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 PGDP52209 483 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 BCAT1P54687 386 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 CHAF1AQ13111 956 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-211ENST00000476215 STARD3Q14849 445 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 MANEALQ5VSG8 457 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 SLC9A4Q6AI14 798 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 MZT2AQ6P582 158 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 XAGE5Q8WWM1 108 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 R3HDM4Q96D70 268 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 SNX27Q96L92 541 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 SELENOOQ9BVL4 669 aa5.88□□□□□ -1.47
PTCD3-211ENST00000476215 FER1L4A9Z1Z3 1794 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms