RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CCDC33Q8N5R6 958 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 RDH13Q8NBN7 331 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 MDGA1Q8NFP4 955 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 HPS3Q969F9 1004 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 SPACA7Q96KW9 195 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 PNKPQ96T60 521 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 MRPL45Q9BRJ2 306 aaKnown RBP11.54□□□□□ -0.56
CDRT1-205ENST00000475944 RNF38Q9H0F5 515 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 AGPAT3Q9NRZ7 376 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 SMPD4Q9NXE4 827 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 TBC1D14Q9P2M4 693 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 PTPRDP23468 1912 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 UBE4BO95155 1302 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 A8MXQ7 604 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 RTN3O95197 1032 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 STAU1O95793 577 aaKnown RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 CST3P01034 146 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 APODP05090 189 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 HOXD13P35453 343 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 SNRPFP62306 86 aaKnown RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 IFRD2Q12894 506 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 TRPC3Q13507 836 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 E2F4Q16254 413 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 EOGTQ5NDL2 527 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 FAM26FQ5R3K3 315 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 TTC30AQ86WT1 665 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 LINC00301Q8NCQ3 95 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 B3GALNT2Q8NCR0 500 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 ZNF507Q8TCN5 953 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 WHAMMQ8TF30 809 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 OVCA2Q8WZ82 227 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 OTUB2Q96DC9 234 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 INTS4Q96HW7 963 aaKnown RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 ZNF518BQ9C0D4 1074 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 POLMQ9NP87 494 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-205ENST00000475944 TMEM9BQ9NQ34 198 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 CFAP97Q9P2B7 532 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 MTMR6Q9Y217 621 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 ATP8B3O60423 1300 aa11.53□□□□□ -0.56
CDRT1-205ENST00000475944 SDK1Q7Z5N4 2213 aa11.52□□□□□ -0.56
CDRT1-205ENST00000475944 SPTLC2O15270 562 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 TGFB1I1O43294 461 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 PPP6R2O75170 966 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 KAT7O95251 611 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 KLF8O95600 359 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 MBL2P11226 248 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 ADH5P11766 374 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 BCKDHBP21953 392 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 YWHAQP27348 245 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 ATICP31939 592 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 TIE1P35590 1138 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 GRIA2P42262 883 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 DHPSP49366 369 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CYP2J2P51589 502 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CYP24A1Q07973 514 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 PREPLQ4J6C6 727 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CNNM4Q6P4Q7 775 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 RHBDF2Q6PJF5 856 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 LPCAT2Q7L5N7 544 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 EPM2AIP1Q7L775 607 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 NUP93Q8N1F7 819 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 ALLCQ8N6M5 410 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 IQUBQ8NA54 791 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 IL17RCQ8NAC3 791 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 TXNDC5Q8NBS9 432 aaKnown RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 OLIG1Q8TAK6 271 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 FBXO32Q969P5 355 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CCDC127Q96BQ5 260 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 DHX58Q96C10 678 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CGNQ9P2M7 1197 aaKnown RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 NXF1Q9UBU9 619 aaKnown RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 EVLQ9UI08 416 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 CIZ1Q9ULV3 898 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-205ENST00000475944 NME7Q9Y5B8 376 aa11.52□□□□□ -0.57
CDRT1-205ENST00000475944 A0A0A0MRY4 1105 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 E2F8A0AVK6 867 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 SGK1O00141 431 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 CLDN5O00501 218 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 SCAMP3O14828 347 aaKnown RBP11.51□□□□□ -0.57
CDRT1-205ENST00000475944 CLIC2O15247 247 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 MAP3K13O43283 966 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 STX6O43752 255 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 PHACTR2O75167 634 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 CEACAM1P13688 526 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 CSRP1P21291 193 aaKnown RBP11.51□□□□□ -0.57
CDRT1-205ENST00000475944 P2RY2P41231 377 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 DPP6P42658 865 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 SLC6A11P48066 632 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms