RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 TRIM59Q8IWR1 403 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 SH3RF2Q8TEC5 729 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 HNRNPABQ99729 332 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 EBF3Q9H4W6 596 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 OBP2AQ9NY56 170 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 DLGAP2Q9P1A6 1054 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 WNT6Q9Y6F9 365 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 WDFY4Q6ZS81 3184 aa13.94□□□□□ -0.18
NIPAL3-206ENST00000475663 HHLA1C9JL84 531 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 WEE1P30291 646 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 PLA2G5P39877 138 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 APBA1Q02410 837 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 ARHGAP29Q52LW3 1261 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 NAIF1Q69YI7 327 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 ZNF852Q6ZMS4 543 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 IRF2BP1Q8IU81 584 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 MLKLQ8NB16 471 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 LMO3Q8TAP4 145 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 FAM3CQ92520 227 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 CCSER2Q9H7U1 834 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 CSNK1G1Q9HCP0 422 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 HPS4Q9NQG7 708 aa13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.93□□□□□ -0.18
NIPAL3-206ENST00000475663 TULP2O00295 520 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 CYP26A1O43174 497 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 RTN3O95197 1032 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 AFPP02771 609 aaKnown RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 CD19P15391 556 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 ACO1P21399 889 aaKnown RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 PTPN5P54829 565 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 FZD5Q13467 585 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 MTF1Q14872 753 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 ANGPT1Q15389 498 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 ZNF77Q15935 545 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 CC2D1AQ6P1N0 951 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 UBR7Q8N806 425 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 ATOH1Q92858 354 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 WBP2Q969T9 261 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 FAM83CQ9BQN1 747 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 LINC00597Q9H2U6 94 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 THG1LQ9NWX6 298 aaKnown RBP13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 NUDT5Q9UKK9 219 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 PCDHB4Q9Y5E5 795 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 CPQQ9Y646 472 aa13.92□□□□□ -0.18
NIPAL3-206ENST00000475663 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 RNF225M0QZC1 329 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 LEFTY2O00292 366 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 COCHO43405 550 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 GNA14O95837 355 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 TBX18O95935 607 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 OAS1P00973 400 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 CCDC192P0DO97 292 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 IRF1P10914 325 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 MBL2P11226 248 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 CTHP32929 405 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 MARSP56192 900 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 USP4Q13107 963 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 ZNF268Q14587 947 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 PON2Q15165 354 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 TPD52L1Q16890 204 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 GOLGA7BQ2TAP0 167 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 FOXR2Q6PJQ5 311 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 TTC30AQ86WT1 665 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 UBA3Q8TBC4 463 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 NDRG1Q92597 394 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 CEP295NLQ96MC4 621 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 DUSP16Q9BY84 665 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 KIF9Q9HAQ2 790 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 NMUR1Q9HB89 426 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 TRPV5Q9NQA5 729 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 SPATA6Q9NWH7 488 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 OSER1Q9NX31 292 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 DUS2Q9NX74 493 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 IL37Q9NZH6 218 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 PTPRDP23468 1912 aa13.91□□□□□ -0.18
NIPAL3-206ENST00000475663 A0A1W2PQH9 124 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 MDM4O15151 490 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 BRD2P25440 801 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 HOXC13P31276 330 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 MTIF2P46199 727 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 IFNAR2P48551 515 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 RUNX3Q13761 415 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 ITPRIPL2Q3MIP1 535 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 ZNF687Q8N1G0 1237 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
NIPAL3-206ENST00000475663 CHFRQ96EP1 664 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms