RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CDO1Q16878 200 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 EFHC1Q5JVL4 640 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 SIX6OS1Q8N1H7 587 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 KCTD13Q8WZ19 329 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 SMARCD1Q96GM5 515 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 CASD1Q96PB1 797 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 SLITRK1Q96PX8 696 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 RTP3Q9BQQ7 232 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 HEMGNQ9BXL5 484 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 ZNF446Q9NWS9 450 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 DNAJB4Q9UDY4 337 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 PCSK1NQ9UHG2 260 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 RASAL2Q9UJF2 1139 aa20.77■□□□□ 0.92
SSR1-204ENST00000474597 UTP11Q9Y3A2 253 aaKnown RBP20.77■□□□□ 0.92
SSR1-204ENST00000474597 LRRD1A4D1F6 860 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 TTI1O43156 1089 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 BEST1O76090 585 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 TNFRSF8P28908 595 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 MIPP30301 263 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 TAF5Q15542 800 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 TCTN1Q2MV58 587 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 BEND6Q5SZJ8 279 aaPredicted RBP20.76■□□□□ 0.91
SSR1-204ENST00000474597 TXNRD3NBQ6F5E7 133 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 CCDC137Q6PK04 289 aaKnown RBP20.76■□□□□ 0.91
SSR1-204ENST00000474597 NPAS4Q8IUM7 802 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 ARFGAP1Q8N6T3 406 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 CLEC4CQ8WTT0 213 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 CFAP57Q96MR6 1250 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 NCAPGQ9BPX3 1015 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 MRPL9Q9BYD2 267 aaKnown RBP20.76■□□□□ 0.91
SSR1-204ENST00000474597 C11orf49Q9H6J7 331 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 GDF3Q9NR23 364 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 USP18Q9UMW8 372 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 MICAL3Q7RTP6 2002 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 ATP11AP98196 1134 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 CYP1B1Q16678 543 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 C15orf59Q2T9L4 293 aaPredicted RBP20.76■□□□□ 0.91
SSR1-204ENST00000474597 SMTNL2Q2TAL5 461 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 KAZNQ674X7 775 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 TRNP1Q6NT89 227 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 CCDC105Q8IYK2 499 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 DNAJC5GQ8N7S2 189 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 IFT81Q8WYA0 676 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 MYLPFQ96A32 169 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 RAB17Q9H0T7 212 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 NRDE2Q9H7Z3 1164 aa20.76■□□□□ 0.91
SSR1-204ENST00000474597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 FAM187AA6NFU0 413 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 ZSCAN5CA6NGD5 496 aaPredicted RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 TJP3O95049 919 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 CLTBP09497 229 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 SIX1Q15475 284 aaPredicted RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 CCDC14Q49A88 953 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 TFDP3Q5H9I0 405 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 FAM171BQ6P995 826 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 MFSD7Q6UXD7 560 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 SPOCD1Q6ZMY3 1216 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 ARCQ7LC44 396 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 GSPT2Q8IYD1 628 aaKnown RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 ZDHHC14Q8IZN3 488 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 C12orf50Q8NA57 414 aaPredicted RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 FAM149B1Q96BN6 582 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 ACSF2Q96CM8 615 aaPredicted RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 COLEC11Q9BWP8 271 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 NGRNQ9NPE2 291 aaKnown RBP20.75■□□□□ 0.91
SSR1-204ENST00000474597 HOMER3Q9NSC5 361 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 TBX21Q9UL17 535 aa20.75■□□□□ 0.91
SSR1-204ENST00000474597 ESYT3A0FGR9 886 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 TBKBP1A7MCY6 615 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 ATP8B1O43520 1251 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 PRPSAP2O60256 369 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 TRUB2O95900 331 aaKnown RBP20.74■□□□□ 0.91
SSR1-204ENST00000474597 ALDH2P05091 517 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 IL1R2P27930 398 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 COILP38432 576 aaPredicted RBP20.74■□□□□ 0.91
SSR1-204ENST00000474597 TNNT3P45378 269 aaPredicted RBP20.74■□□□□ 0.91
SSR1-204ENST00000474597 FNTAP49354 379 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 GATMP50440 423 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 IKBKEQ14164 716 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 C1orf54Q8WWF1 131 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 RAPGEF5Q92565 580 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 HSPH1Q92598 858 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 KHSRPQ92945 711 aaKnown RBP eCLIP20.74■□□□□ 0.912e-7■■■■□ 23.4
SSR1-204ENST00000474597 SMOQ99835 787 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 LRRC19Q9H756 370 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 PCYOX1Q9UHG3 505 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 NRP1O14786 923 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 HSF2BPO75031 334 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 FBXO21O94952 628 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 MYBL2P10244 700 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 TKTL1P51854 596 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 LBX1P52954 281 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 KCNT1Q5JUK3 1230 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 SH3PXD2AQ5TCZ1 1133 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 SCYL2Q6P3W7 929 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 HDXQ7Z353 690 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 KCTD6Q8NC69 237 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 OR10T2Q8NGX3 314 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 FAM172AQ8WUF8 416 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 CASKIN2Q8WXE0 1202 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms