RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ZNF512Q96ME7 567 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 KLHL5Q96PQ7 755 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 SLITRK1Q96PX8 696 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TMEM209Q96SK2 561 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 PKMYT1Q99640 499 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 LPIN3Q9BQK8 851 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 ZSWIM1Q9BR11 485 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 VN1R3Q9BXE9 311 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 THAP2Q9H0W7 228 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 PLEKHA4Q9H4M7 779 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TLE6Q9H808 572 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 UXTQ9UBK9 157 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 IP6K2Q9UHH9 426 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 ASB3Q9Y575 518 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 NME7Q9Y5B8 376 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 C2orf71A6NGG8 1288 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 SIGLEC16A6NMB1 481 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 E5RJQ4 531 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 F8VP50 259 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 GOLGA8SH3BPF8 625 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 ZNF263O14978 683 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 GRM6O15303 877 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 RNF8O76064 485 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 FGF19O95750 216 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 ZBED1O96006 694 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 CYP1A2P05177 515 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 CFHP08603 1231 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 RALAP11233 206 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 YWHAQP27348 245 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 PPP3CCP48454 512 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 ERVFC1P60507 584 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 GNG11P61952 73 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 SLC6A3Q01959 620 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 ADIGQ0VDE8 80 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 LRIT3Q3SXY7 679 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 PABPC1LQ4VXU2 614 aaKnown RBP10.88□□□□□ -0.67
COL12A1-206ENST00000474564 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 PPM1LQ5SGD2 360 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 PAQR9Q6ZVX9 377 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 MON1BQ7L1V2 547 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 SCUBE3Q8IX30 993 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 WDTC1Q8N5D0 677 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 KREMEN2Q8NCW0 462 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 STKLD1Q8NE28 680 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-206ENST00000474564 SLC35G2Q8TBE7 412 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 FEZF2Q8TBJ5 459 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 ZNF564Q8TBZ8 553 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-206ENST00000474564 RNF139Q8WU17 664 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 AUTS2Q8WXX7 1259 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 FAM149B1Q96BN6 582 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 GCNAQ96QF7 691 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 CPXM1Q96SM3 734 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 KCNK16Q96T55 309 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 CDCA3Q99618 268 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-206ENST00000474564 SMOQ99835 787 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 CERS4Q9HA82 394 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 TMLHEQ9NVH6 421 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 TAS2R14Q9NYV8 317 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 STAP1Q9ULZ2 295 aa10.88□□□□□ -0.67
COL12A1-206ENST00000474564 MYH10P35580 1976 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 LILRB3O75022 631 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 HSF2BPO75031 334 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 XYLBO75191 536 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 CSPG5O95196 566 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 RRM1P23921 792 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 GBP1P32455 592 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 RNASE9P60153 205 aaKnown RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 YWHAZP63104 245 aaKnown RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 MRPS5P82675 430 aaKnown RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 IFRD2Q12894 506 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 PIGHQ14442 188 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 ACAP1Q15027 740 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 TCEAL1Q15170 157 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 DDR2Q16832 855 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 PTPN20Q4JDL3 420 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 ZNF569Q5MCW4 686 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 CYP4A22Q5TCH4 519 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 BTBD8Q5XKL5 378 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 PLEKHA7Q6IQ23 1121 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 SYT10Q6XYQ8 523 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 SND1Q7KZF4 910 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 MON1AQ86VX9 555 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 SCML4Q8N228 414 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 CDK5RAP1Q96SZ6 601 aaKnown RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 TLR8Q9NR97 1041 aaKnown RBP10.87□□□□□ -0.67
COL12A1-206ENST00000474564 ASNSD1Q9NWL6 643 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 LMCD1Q9NZU5 365 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 ANAPC7Q9UJX3 599 aa10.87□□□□□ -0.67
COL12A1-206ENST00000474564 NENFQ9UMX5 172 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms