RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TREHO43280 583 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NMT2O60551 498 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ATP5HO75947 161 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CXCL14O95715 111 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TMEM253P0C7T8 217 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NCAM1P13591 858 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CTSEP14091 401 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 UQCRBP14927 111 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SPRP35270 261 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 EIF4A3P38919 411 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SERPINB4P48594 390 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ETF1P62495 437 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RPP38P78345 283 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CAMK2GQ13555 558 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 PDGFRLQ15198 375 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CDO1Q16878 200 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 GRAMD4Q6IC98 578 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 CYP4F22Q6NT55 531 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 EMBQ6PCB8 327 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 FAM47EQ6ZV65 393 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 STOX1Q6ZVD7 989 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ATL1Q8WXF7 558 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TMA16Q96EY4 203 aaKnown RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TMEM176AQ96HP8 235 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 ARID3AQ99856 593 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TCF25Q9BQ70 676 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 IRX2Q9BZI1 471 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SIK2Q9H0K1 926 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 RAD21L1Q9H4I0 556 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 EPB41L4AQ9HCS5 686 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SETD4Q9NVD3 440 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 TMEM161AQ9NX61 479 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 SEPT3Q9UH03 358 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 KLHL3Q9UH77 587 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 VPS28Q9UK41 221 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 GTF3C4Q9UKN8 822 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NALCNQ8IZF0 1738 aa4.81□□□□□ -1.64
CCNL1-215ENST00000474539 NFAT5O94916 1531 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CICQ96RK0 1608 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SLC12A8A0AV02 714 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PSMD12O00232 456 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 INPP4BO15327 924 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MGEA5O60502 916 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 VPS26AO75436 327 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 USP2O75604 605 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 NDUFA10O95299 355 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 DNTTP04053 509 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ITGB3P05106 788 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PGK2P07205 417 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TGM2P21980 687 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 NUDT1P36639 197 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GCNT1Q02742 428 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SRSF11Q05519 484 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ADCY1Q08828 1119 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GRSF1Q12849 480 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GNA13Q14344 377 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 KRT31Q15323 416 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ALG11Q2TAA5 492 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PAN2Q504Q3 1202 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MPPE1Q53F39 396 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 BRMS1LQ5PSV4 323 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SETD3Q86TU7 594 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CATSPER3Q86XQ3 398 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 STX19Q8N4C7 294 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 KCTD13Q8WZ19 329 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SAAL1Q96ER3 474 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CAPS2Q9BXY5 557 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 NEUROG2Q9H2A3 272 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TEKT2Q9UIF3 430 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MON2Q7Z3U7 1717 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MFAP3LO75121 409 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GLP2RO95838 553 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PABPC1P11940 636 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GPD2P43304 727 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MAP3K10Q02779 954 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 C1QBPQ07021 282 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 DMC1Q14565 340 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PKN1Q16512 942 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CRLF3Q8IUI8 442 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC71Q8N4P6 559 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MMGT1Q8N4V1 131 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GBP7Q8N8V2 638 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TDRD5Q8NAT2 981 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CEP70Q8NHQ1 597 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 FEZF2Q8TBJ5 459 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PHOSPHO2Q8TCD6 241 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TRPM4Q8TD43 1214 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HAPLN3Q96S86 360 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 OMDQ99983 421 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.8□□□□□ -1.644e-13■□□□□ 10.9
CCNL1-215ENST00000474539 FDXACB1Q9BRP7 624 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TARS2Q9BW92 718 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PABPC3Q9H361 631 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PLEKHA4Q9H4M7 779 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ARHGEF38Q9NXL2 777 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms