RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CILPO75339 1184 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 BEST1O76090 585 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 SP9P0CG40 484 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 CHRNB1P11230 501 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 ARSAP15289 507 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 CD58P19256 250 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 SLC5A3P53794 718 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 MORC3Q14149 939 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 ITPRIPL2Q3MIP1 535 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 KLHL10Q6JEL2 608 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 RALGPS2Q86X27 583 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-203ENST00000474056 CCDC150Q8NCX0 1101 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 WHAMMQ8TF30 809 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 DHTKD1Q96HY7 919 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-203ENST00000474056 CHRDQ9H2X0 955 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 LMAN1LQ9HAT1 526 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 RAB20Q9NX57 234 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 FAM186AA6NE01 2351 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 KIAA1549LQ6ZVL6 1849 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 OTOL1A6NHN0 477 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-203ENST00000474056 PPP1R3GB7ZBB8 358 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 TNFRSF10BO14763 440 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 GFRA3O60609 400 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 RTN3O95197 1032 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-203ENST00000474056 HDCP19113 662 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 YWHAQP27348 245 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 ADORA2BP29275 332 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 PPP3CCP48454 512 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 ZXDBP98169 803 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 MTAPQ13126 283 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 RUNX3Q13761 415 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 PON2Q15165 354 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 CC2D1AQ6P1N0 951 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-203ENST00000474056 C1orf228Q6PIY5 440 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 SCAMP5Q8TAC9 235 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 SH3RF2Q8TEC5 729 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 FBXO32Q969P5 355 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 SLITRK1Q96PX8 696 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 DUSP9Q99956 384 aaKnown RBP19.02■□□□□ 0.64
UPF3A-203ENST00000474056 NT5C1AQ9BXI3 368 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 RBM12Q9NTZ6 932 aaKnown RBP19.02■□□□□ 0.64
UPF3A-203ENST00000474056 ARHGAP26Q9UNA1 814 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 CTNND2Q9UQB3 1225 aa19.02■□□□□ 0.64
UPF3A-203ENST00000474056 RIF1Q5UIP0 2472 aaKnown RBP19.01■□□□□ 0.63
UPF3A-203ENST00000474056 ABL1P00519 1130 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 OAS1P00973 400 aaKnown RBP19.01■□□□□ 0.63
UPF3A-203ENST00000474056 TCF3P15923 654 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 PFKLP17858 780 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 PPP1R2P41236 205 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 MAP3K7CLP57077 242 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 UBE2HP62256 183 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 ZNF394Q53GI3 561 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 TTI2Q6NXR4 508 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 ASCL5Q7RTU5 278 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 NELFBQ8WX92 580 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 TATDN2Q93075 761 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 SLC35C1Q96A29 364 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 CHFRQ96EP1 664 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 ARID3AQ99856 593 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 RNF38Q9H0F5 515 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 CSNK1G1Q9HCP0 422 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 ARMCX3Q9UH62 379 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-203ENST00000474056 R4GN57 208 aa19.01■□□□□ 0.63
UPF3A-203ENST00000474056 ZFHX2Q9C0A1 2572 aaPredicted RBP19■□□□□ 0.63
UPF3A-203ENST00000474056 PRR23AA6NEV1 266 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 OLFM2O95897 454 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 PDE6CP51160 858 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 GAS6Q14393 721 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 CLEC20AQ6ZU45 233 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 OSCP1Q8WVF1 389 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 OVCA2Q8WZ82 227 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 NKD2Q969F2 451 aaPredicted RBP19■□□□□ 0.63
UPF3A-203ENST00000474056 CYFIP2Q96F07 1278 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 CEP63Q96MT8 703 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 HNRNPABQ99729 332 aaKnown RBP19■□□□□ 0.63
UPF3A-203ENST00000474056 PRMT8Q9NR22 394 aaPredicted RBP19■□□□□ 0.63
UPF3A-203ENST00000474056 DUS2Q9NX74 493 aaKnown RBP19■□□□□ 0.63
UPF3A-203ENST00000474056 IL37Q9NZH6 218 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 FBXO4Q9UKT5 387 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 COQ4Q9Y3A0 265 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 CPQQ9Y646 472 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 WNT6Q9Y6F9 365 aa19■□□□□ 0.63
UPF3A-203ENST00000474056 PTPRZ1P23471 2315 aaPredicted RBP19■□□□□ 0.63
UPF3A-203ENST00000474056 LEFTY2O00292 366 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 FAM200BP0CF97 657 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 TRIM21P19474 475 aaKnown RBP18.99■□□□□ 0.63
UPF3A-203ENST00000474056 IFNAR2P48551 515 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 STX17P56962 302 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 SLC7A9P82251 487 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 CSTF1Q05048 431 aaKnown RBP18.99■□□□□ 0.63
UPF3A-203ENST00000474056 PDGFRLQ15198 375 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 EML3Q32P44 896 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 CCDC40Q4G0X9 1142 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 PPP1R26Q5T8A7 1209 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-203ENST00000474056 TSSK4Q6SA08 328 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 GPRIN1Q7Z2K8 1008 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 FILIP1Q7Z7B0 1213 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 PDZD8Q8NEN9 1154 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 JAKMIP2Q96AA8 810 aa18.99■□□□□ 0.63
UPF3A-203ENST00000474056 FAXDC2Q96IV6 333 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms