RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DDX25Q9UHL0 483 aaKnown RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 ZNF148Q9UQR1 794 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PCDHA2Q9Y5H9 948 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ALG6Q9Y672 507 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ZMYM2Q9UBW7 1377 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ESYT2A0FGR8 921 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 HNRNPRO43390 633 aaKnown RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 DCXO43602 365 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 AP1G1O43747 822 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 NMT2O60551 498 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 KPNA6O60684 536 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 FKBP6O75344 327 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ARIH2O95376 493 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CXCL10P02778 98 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ZCCHC18P0CG32 403 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TSPY3P0CV98 308 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TSPY8P0CW00 308 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ANPEPP15144 967 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TNFAIP3P21580 790 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 SLC16A2P36021 539 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TXKP42681 527 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ARHGAP4P98171 946 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CBX3Q13185 183 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PTK6Q13882 451 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 RASA2Q15283 850 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TRMT5Q32P41 509 aaKnown RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 HSP90AA5PQ58FG0 334 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 HYIQ5T013 277 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CCDC62Q6P9F0 684 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 AAGABQ6PD74 315 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 B3GNT6Q6ZMB0 384 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TRABD2AQ86V40 505 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PASD1Q8IV76 773 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 KBTBD2Q8IY47 623 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CYP4X1Q8N118 509 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 SNX29Q8TEQ0 813 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 MAML1Q92585 1016 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 SYT11Q9BT88 431 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 TRAIPQ9BWF2 469 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PLVAPQ9BX97 442 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 STK33Q9BYT3 514 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 NINJ2Q9NZG7 142 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 MTMR7Q9Y216 660 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 MTO1Q9Y2Z2 717 aaKnown RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 TANC1Q9C0D5 1861 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 A0A0J9YVX5 310 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 CIB2O75838 187 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 MTA2O94776 668 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 ICAM1P05362 532 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 SELPP16109 830 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 SMARCA1P28370 1054 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 ASPHQ12797 758 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 CTTNQ14247 550 aaKnown RBP10.56□□□□□ -0.72
APTX-216ENST00000472896 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
APTX-216ENST00000472896 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 CNKSR3Q6P9H4 555 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 IZUMO2Q6UXV1 221 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 SLC30A10Q6XR72 485 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.56□□□□□ -0.72
APTX-216ENST00000472896 HFE2Q6ZVN8 426 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 LRRC8DQ7L1W4 858 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
APTX-216ENST00000472896 OLIG1Q8TAK6 271 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 CCDC110Q8TBZ0 833 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 MPP4Q96JB8 637 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 OSBPL8Q9BZF1 889 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 NDE1Q9NXR1 346 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
APTX-216ENST00000472896 ABHD14A-ACY1A0A1B0GW23 586 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 TSPY2A6NKD2 308 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 E2F6O75461 281 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 CKBP12277 381 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 NR2F2P24468 414 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 NAPAP54920 295 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 ADARP55265 1226 aaKnown RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 RAB15P59190 212 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 SIX1Q15475 284 aaPredicted RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 CCDC92Q53HC0 331 aaPredicted RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 CFAP157Q5JU67 520 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 RNF207Q6ZRF8 634 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 OTOAQ7RTW8 1153 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.55□□□□□ -0.72
APTX-216ENST00000472896 SYT2Q8N9I0 419 aaPredicted RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 PNMA1Q8ND90 353 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 GLIS3Q8NEA6 775 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 AFG1LQ8WV93 481 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 SCFD1Q8WVM8 642 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 WNT8BQ93098 351 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms