RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 RFX1P22670 979 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 CACNA2D1P54289 1103 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 KCNH2Q12809 1159 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 GRM2Q14416 872 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 FAM78AQ5JUQ0 283 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 UNC93AQ86WB7 457 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 TRIM59Q8IWR1 403 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 SLC44A3Q8N4M1 653 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 C12orf29Q8N999 325 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 SLC2A14Q8TDB8 520 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 NXPE3Q969Y0 559 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 JAKMIP2Q96AA8 810 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 ZSWIM3Q96MP5 696 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 NT5C1BQ96P26 610 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 MED15Q96RN5 788 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 RTKNQ9BST9 563 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 NT5C1AQ9BXI3 368 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 FOXQ1Q9C009 403 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 TRPC7Q9HCX4 862 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 NOL4O94818 638 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 MICAL2O94851 1124 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 FAM200BP0CF97 657 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 HMGA1P17096 107 aaKnown RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 ERCC5P28715 1186 aaPredicted RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 MCCD1P59942 119 aaPredicted RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 LMNB2Q03252 620 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 CUL2Q13617 745 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 STX1AQ16623 288 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 TANGO2Q6ICL3 276 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 FAM114A1Q8IWE2 563 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 MRPS31Q92665 395 aaKnown RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 SMARCD1Q96GM5 515 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 IL21Q9HBE4 155 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 ZFP14Q9HCL3 533 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 PARD6AQ9NPB6 346 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 ARHGEF3Q9NR81 526 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 TMEM30AQ9NV96 361 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
CLRN1-205ENST00000472224 COQ4Q9Y3A0 265 aa12.59□□□□□ -0.39
CLRN1-205ENST00000472224 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 DPYSL4O14531 572 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 TADA3O75528 432 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 FCARP24071 287 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 TBXAS1P24557 533 aaPredicted RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 VIPR2P41587 438 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 MARSP56192 900 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 MAP3K7CLP57077 242 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 USP46P62068 366 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 ZNF528Q3MIS6 628 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 RBM43Q6ZSC3 357 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 FUKQ8N0W3 1084 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 PPM1KQ8N3J5 372 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 SMARCD2Q92925 531 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 PLA2G2FQ9BZM2 168 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 SMG9Q9H0W8 520 aaKnown RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 ANO10Q9NW15 660 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 TMEM63CQ9P1W3 806 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 KIF26AQ9ULI4 1882 aaPredicted RBP12.58□□□□□ -0.4
CLRN1-205ENST00000472224 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
CLRN1-205ENST00000472224 P4HA2O15460 535 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 ECI2O75521 394 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 PRAMEF12O95522 483 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 ABL1P00519 1130 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 F11P03951 625 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
CLRN1-205ENST00000472224 CD19P15391 556 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 AVPR1AP37288 418 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 SLC5A3P53794 718 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 PPM1JQ5JR12 505 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 TXNDC8Q6A555 127 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 TMEM92Q6UXU6 159 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 PAQR9Q6ZVX9 377 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 RRAGAQ7L523 313 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 TMEM150AQ86TG1 271 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 ARHGEF19Q8IW93 802 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 YAF2Q8IY57 180 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 TTC39CQ8N584 583 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms