RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 C12orf29Q8N999 325 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 PRSS33Q8NF86 280 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 TATDN2Q93075 761 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 SHDQ96IW2 340 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 LRRC3BQ96PB8 259 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 DDX23Q9BUQ8 820 aaKnown RBP15.98■□□□□ 0.15
CALD1-215ENST00000472096 SRRTQ9BXP5 876 aaKnown RBP15.98■□□□□ 0.15
CALD1-215ENST00000472096 FAM124BQ9H5Z6 455 aaPredicted RBP15.98■□□□□ 0.15
CALD1-215ENST00000472096 KIF9Q9HAQ2 790 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 TRPC7Q9HCX4 862 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 HEBP1Q9NRV9 189 aa15.98■□□□□ 0.15
CALD1-215ENST00000472096 ZNF263O14978 683 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 CHADO15335 359 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 PI15O43692 258 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 ADORA2BP29275 332 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 IFRD2Q12894 506 aaPredicted RBP15.97■□□□□ 0.15
CALD1-215ENST00000472096 ZNF268Q14587 947 aaPredicted RBP15.97■□□□□ 0.15
CALD1-215ENST00000472096 TPRG1Q6ZUI0 275 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 YAF2Q8IY57 180 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 NUP93Q8N1F7 819 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 TTC39CQ8N584 583 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 CELF5Q8N6W0 485 aaKnown RBP15.97■□□□□ 0.15
CALD1-215ENST00000472096 MLKLQ8NB16 471 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 ZMIZ2Q8NF64 920 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 BPIFB1Q8TDL5 484 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 USP13Q92995 863 aaPredicted RBP15.97■□□□□ 0.15
CALD1-215ENST00000472096 MED15Q96RN5 788 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 KCNK16Q96T55 309 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 HNRNPABQ99729 332 aaKnown RBP15.97■□□□□ 0.15
CALD1-215ENST00000472096 PRRX2Q99811 253 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 SMOQ99835 787 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 FOXQ1Q9C009 403 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 TRPV5Q9NQA5 729 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 CISHQ9NSE2 258 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 CCL26Q9Y258 94 aa15.97■□□□□ 0.15
CALD1-215ENST00000472096 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 KANSL1LA0AUZ9 987 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 C2orf78A6NCI8 922 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 TNFRSF10BO14763 440 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 BEST1O76090 585 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 RTN3O95197 1032 aaPredicted RBP15.96■□□□□ 0.15
CALD1-215ENST00000472096 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
CALD1-215ENST00000472096 SLC5A3P53794 718 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 CUL2Q13617 745 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 DPCR1Q3MIW9 517 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 ARHGAP29Q52LW3 1261 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 ZNF394Q53GI3 561 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 PJA1Q8NG27 643 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 GPT2Q8TD30 523 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 SLITRK1Q96PX8 696 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 SLC22A12Q96S37 553 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 KCNK17Q96T54 332 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 DNAI2Q9GZS0 605 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 CSNK1G1Q9HCP0 422 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 TDP1Q9NUW8 608 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 TRPM5Q9NZQ8 1165 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 GCNT4Q9P109 453 aa15.96■□□□□ 0.15
CALD1-215ENST00000472096 SHISA7A6NL88 538 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 GOLGA6L22H0YM25 854 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 P4HA2O15460 535 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 CKMP06732 381 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 USP17L7P0C7H9 530 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 FAM200BP0CF97 657 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 CCDC192P0DO97 292 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 YWHAQP27348 245 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 PPP3CCP48454 512 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 RAD23BP54727 409 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 MAP3K7CLP57077 242 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 TAF10Q12962 218 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 USP4Q13107 963 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 CLEC20AQ6ZU45 233 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 CCDC105Q8IYK2 499 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 UBR7Q8N806 425 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 SLC4A11Q8NBS3 891 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 RIN3Q8TB24 985 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 CYFIP2Q96F07 1278 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 ZFYVE19Q96K21 471 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 CNOT6LQ96LI5 555 aaKnown RBP15.95■□□□□ 0.14
CALD1-215ENST00000472096 NT5C1BQ96P26 610 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 LTB4R2Q9NPC1 389 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.95■□□□□ 0.14
CALD1-215ENST00000472096 CACNA1HO95180 2353 aa15.95■□□□□ 0.14
CALD1-215ENST00000472096 ZNF840PA6NDX5 716 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 AFPP02771 609 aaKnown RBP15.94■□□□□ 0.14
CALD1-215ENST00000472096 PFKLP17858 780 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 CD72P21854 359 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 TBXAS1P24557 533 aaPredicted RBP15.94■□□□□ 0.14
CALD1-215ENST00000472096 PDE6CP51160 858 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 PRSS12P56730 875 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 YWHAEP62258 255 aaKnown RBP15.94■□□□□ 0.14
CALD1-215ENST00000472096 CETN1Q12798 172 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 KCNH2Q12809 1159 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 TCF15Q12870 199 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 LRMPQ12912 555 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 ZNF77Q15935 545 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 PPP1R26Q5T8A7 1209 aaPredicted RBP15.94■□□□□ 0.14
CALD1-215ENST00000472096 ARL14EPQ8N8R7 260 aaPredicted RBP15.94■□□□□ 0.14
CALD1-215ENST00000472096 PDZD8Q8NEN9 1154 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 SCAMP5Q8TAC9 235 aa15.94■□□□□ 0.14
CALD1-215ENST00000472096 LMO3Q8TAP4 145 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms